Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00084 ATGGACTTTGACTTAAATATGCCATATTTTGAGGAGGAGGACGTGAATTCGGACACTGAAAGTCAGGTTTCGTCACTCATTCAGAGCAATACTGAAAATATCCCTAAAGATCCAATTGTAAACAATGTCCAACCAATTGCTGCTGTCTCAATTTTGGTTGATGCTCAACCGATGTACTGTACTGATTCTTTCTATGTCCATGCCGATCAAGAAATACCATTGGGCGCGGGACGGCGCCGTTACGTTCGCCGCGGACGACCTCATCCATCTGATCTGACCACCTTCTGCACAAATTTTCATTGCAAGACAAGAAACACTCCTATGTGGCGCTCTGGACCTATGGGTCCAAAGACTCTGTGCAATGCATGTGGCATTTACTACAAGAAACATATGGTTCGTCGAGATGTCCCTGTTGCTTCAAGTTCTGTCCCACCACCTGGAACCATGGGAGGAGATCCTTCTTCTTCAACTTCCTAA 477 0.4549 MDFDLNMPYFEEEDVNSDTESQVSSLIQSNTENIPKDPIVNNVQPIAAVSILVDAQPMYCTDSFYVHADQEIPLGAGRRRYVRRGRPHPSDLTTFCTNFHCKTRNTPMWRSGPMGPKTLCNACGIYYKKHMVRRDVPVASSSVPPPGTMGGDPSSSTS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00084 158 MobiDBLite consensus disorder prediction 138 158 - -
Mepo6g00084 158 Gene3D - 90 143 IPR013088 GO:0006355|GO:0008270
Mepo6g00084 158 CDD ZnF_GATA 99 130 IPR000679 GO:0006355|GO:0043565
Mepo6g00084 158 ProSiteProfiles GATA-type zinc finger domain profile. 100 136 IPR000679 GO:0006355|GO:0043565
Mepo6g00084 158 SMART GATA_3 90 145 IPR000679 GO:0006355|GO:0043565
Mepo6g00084 158 PANTHER OS01G0976800 PROTEIN 33 130 - -
Mepo6g00084 158 Pfam GATA zinc finger 97 132 IPR000679 GO:0006355|GO:0043565
Mepo6g00084 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 91 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00084 Mepo-Chr6 805189 806939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00084 96 134 C2C2-Gata Transcription Factor Family AT3G20750 61.538 1.01e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo6g00084 GATA 1.8e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00084 - - psat:127115930 97.4413