Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00055 ATGGAACTATCAGATTTACAAAACAACAAGCAGAAGAGAGGCACCACCATTCATCCTCATCCCCACCACCAACAACAAGAATCATCCTCACCTTCAAATTCTCAGCAACAACTTGTGGTCCCTTTTGATGGAAGACCATCACCTTTCATTATGGGCTCCATCTCCAATATTCAACCTTCTTCTAACTCTTCTCCCTCCAATTCATCTTCTTCTTCAGCTTCAGCTTCTGCTTCTGCTTCTGCTTCTCTCGCAATTGCCACCAGATCTGAACCTGATGTATCCAACAACCAAATTCAACCTTTTTCTTCATCCTCCACCGCGGTCACCGCCGTTGCAAATCCTCCAAAACGATCCACTAAGGATAGACACACAAAAGTTGACGGCCGTGGCAGGAGAATTCGAATGCCAGCGACATGTGCAGCAAGAGTTTTCCAGTTGACCAGAGAATTAGGCCACAAATCCGATGGTGAAACAATTGAATGGCTTCTTCAACAAGCGGAGCCGGCAATCATTGCTGCCACCGGCACCGGGACAATTCCAGCCAATTTCTCAACGCTCAACGTCTCACTCCGTAGCAGCGGCTCTACACTGTCTGCGCCGCCGTCGAAATCGGCTCCTCTCAGTTTTCATAGCGCGCTTGCACTGGCCCATCATCCTTACGAAGAAGCTGCGTACCAACACGCGCCTCTGTTAGGGTTTCATCCTCATCAACAACAGCAACTGATGAACGCTGATCAAATTGGTGAAGCACTTTCAAACGAGAATTACATGAGAAAACGGTATAGAGAAGATCTTTTCAAAGATGATAACAACAATCAAAATGAAAGTGGTGGTGACGGTGATGGTTCTTCTTCTCCCAAAAGTTTCAAAACAAATCATCAACAACAAGATGATATGGGAGAAGGTGACGGTGGTGGAGGAGGAGGAGCTTCTTCATCTTCTTCTGTAGGTAATTCTTTTTCTGGACTTCTTAGACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCTACAGCAGGGAGTGGAAGTACAATTTGGATGGTACCGGTGAGTGGTGGTGCAGCAACTTCAAATTCAGAGACACAGACACAGACACAGACACAAAACATGTGGCCTTTTACTCCTCATGTTCAGTCTCAAAATCATCAAGGCAACGCTTCTGTAACTCCATCTCAGTTACATTTCATGCCAAGGTTCAACGTTCCAGCTTCTGGTGGTGGTGAATTTCAAGGTGGACGTGGTGGTTTACAATTGGGTTCAGCGTATCAACCATCACAGCATTTGGGATTGGCTGTGTCTGATTCCAACTTGGGTATGTTTGCTGCTCTTAATGCTTATACAAGAGCTGGTCATTTCAATATCAACAACTCTTCTGATCATCATCATCAACATTCAATGTCATTGGACTCTCATTCTCGTTCTCAGCCTCAACCTAATGATGAGAGTGGAGAAGATGCTCCTAATACCTCACAATGA 1476 0.4553 MELSDLQNNKQKRGTTIHPHPHHQQQESSSPSNSQQQLVVPFDGRPSPFIMGSISNIQPSSNSSPSNSSSSSASASASASASLAIATRSEPDVSNNQIQPFSSSSTAVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPLSFHSALALAHHPYEEAAYQHAPLLGFHPHQQQQLMNADQIGEALSNENYMRKRYREDLFKDDNNNQNESGGDGDGSSSPKSFKTNHQQQDDMGEGDGGGGGGASSSSSVGNSFSGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGAATSNSETQTQTQTQNMWPFTPHVQSQNHQGNASVTPSQLHFMPRFNVPASGGGEFQGGRGGLQLGSAYQPSQHLGLAVSDSNLGMFAALNAYTRAGHFNINNSSDHHHQHSMSLDSHSRSQPQPNDESGEDAPNTSQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00055 491 MobiDBLite consensus disorder prediction 266 319 - -
Mepo6g00055 491 ProSiteProfiles TCP domain profile. 119 173 IPR017887 -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 271 295 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 1 74 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 454 491 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 469 491 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 90 130 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 116 130 - -
Mepo6g00055 491 Pfam TCP family transcription factor 118 263 IPR017887 -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 90 113 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 21 41 - -
Mepo6g00055 491 MobiDBLite consensus disorder prediction 51 74 - -
Mepo6g00055 491 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 64 440 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00055 Mepo-Chr6 513744 516072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00055 116 436 TCP Transcription Factor Family AT1G35560 44.648 7.00e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo6g00055 TCP 1.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00055 - - adu:107482753 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00055 6 513744 516072 Mepo6g00055 6 513744 516072 ECH