Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00049 ATGGGGTCCCTACATGTTAAATTGCCAGTTCGATTTACCGGACCATCTACTATGCATGACAAAGAGATGGAGAACATGGCATTTTACCTAGCAGAACTTGGTCTTGTAAATTATCATGTCATGGTTTTATTCTCTCCTTCAAAGATTGATGCAGCAGCTGTTTACTCTGCTCGTTCTATACTCAATAGGGTTCCATATTGGACTCAATATCTGCAGAACCTATCTGGCTACTGCAAAGAAAAAATCAAAGACTGTGCCACACAGTTGGTGAAGATACACACGCAGATGCAAGAGATGTTGAAATCCATGCTGTGTCCAAAAAAAAAATCGAGTCCTGAGAAAGCAACACGAACAGTTAAGACACCAGCAGCTGGACCTGTGATTCGTACCTTAACAATTGGCTCCCCAGTGACTACCAATTCAAGAGATCCATCAGCCGCCCCAACCAGGTAA 453 0.4283 MGSLHVKLPVRFTGPSTMHDKEMENMAFYLAELGLVNYHVMVLFSPSKIDAAAVYSARSILNRVPYWTQYLQNLSGYCKEKIKDCATQLVKIHTQMQEMLKSMLCPKKKSSPEKATRTVKTPAAGPVIRTLTIGSPVTTNSRDPSAAPTR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00049 150 SUPERFAMILY Cyclin-like 17 99 IPR036915 -
Mepo6g00049 150 SMART Cyclin_C_2 7 122 IPR004367 -
Mepo6g00049 150 Pfam Cyclin, C-terminal domain 17 111 IPR004367 -
Mepo6g00049 150 Gene3D - 8 122 - -
Mepo6g00049 150 SMART cyclin_7 3 91 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00049 Mepo-Chr6 446290 449107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00049 5 98 Core Cell Cycle Gene Families AT4G37490 43.617 1.84e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00049 K21777 - pvy:116109980 100.523