Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00032 ATGATCCCCTTAACCTTAACTGTTTTCACTCTGTTTTCTGTTCTGTTTTCCTCTGTTTTTGCTTCATCCTTGCTCAGTGATTTCCATGCTCTAGTCACACTTAGACAAGGATTTCAATTCCCAAACCCAGTTATAAACACATGGAACACTTCCAATTTCAGCTCAGTTTGTTCATGGGTTGGAATTCAATGCCACCAGGGTCGAGTCGTGTCGTTGGACCTAACAGATTTGAATCTGTTTGGCTCTGTTTCACCTTCAATTTCATCACTTGATAGACTTTCACACCTTTCCCTTGCAGGCAACAACTTCACTGGAACCATTCACATAACAAACTTAACCAACCTTCAATTTCTAAACATATCCAATAACCAGTTCAGTGGTCACATGGATTGGAACTACTCAACCATGGAAAACTTACAAGTTGTTGATGTCTATAACAATAACTTCACTTCCTTGCTCCCATTGGGAATTCTTGGTTTGAAGAACAAGCTCAAACACTTGGATCTAAGTGGTAACTTTTTCTTTGGTGAAATCCCAAAAAGTTATGGAAATTTAGTTTCTCTTGAGTATCTTTCACTGGCTGGAAATGATATTAGTGGTAAAATCCCTGGTGAGTTAGGGAATCTAAGTAACTTGAGAGAGATTTACTTGGGCTATTACAATTCATATGAAGGTGGAATTCCAGTGGAGTTTGGAAGGTTAACAAAATTGGTTCACATGGATATTTCAAGCTGTGATTTGGATGGTTCAATACCAAGAGAGTTAGGTAACTTGAAAGAGCTAAACACACTTTACTTGCATATAAACCAGCTTTCAGGTTCAATACCAAAACAACTTGGTAACTTGACCAACTTGCTCTACCTTGACCTTTCAAGCAATGCACTCACAGGTGAAATTCCAATTGAGTTCATCAATCTCAACCGCCTCAGGCTTCTCAATCTTTTCTTGAACAGGTTACATGGTTCTATACCTGACTACATTGCAGACTTTCCTGATTTAGACACACTTGGCCTTTGGATGAACAACTTCACAGGTGAAATTCCATACAAACTTGGTCTCAATGGGAAGCTTCAAATACTTGATTTATCTTCCAATAAGCTCACTGGTGTCATTCCACCACATCTTTGTTCCTCAAGCCAGCTTAAAATTTTGATTCTGCTCAATAATTTTCTCTTTGGACCCATACCTGAAGGGTTGGGAACATGTTACAGTCTCACTAGAGTGAGGTTAGGAGAGAATTATTTAAATGGTAGTATTCCAAATGGTTTTCTTTACCTTCCTAAGCTAAATTTAGCAGAGTTGAAAAACAATTACTTGTCAGGAACATTGTCAGAAAATGGTAATGGTTCTTCTAAGCCTGTTAGTTTAGAACAACTTGATTTGTCAAACAATGCATTCTCTGGTCCTTTACCATACTCACTCTCAAACTTCACTTCCCTTCAAATCCTTTTGCTTAGTGGAAACCAATTCTCAGGACCAATTCCACCTTCCATTGGAGGACTAAATCAAGTGCTTAAACTCGACCTTAGCAGAAACTCATTATCAGCTGAAATTCCTCCCGAAATTGGTTACTGTGTTCATCTTACCTACCTTGACATGAGCCAGAACAATCTCTCTGGCTCCATTCCACCATTGATTTCCAATATCCGTATTTTGAATTACTTGAACTTGTCTAGAAACCATTTGAACCAAAGCATACCAAGATCAATAGGAACAATGAAAAGTCTCACAGTTGCAGATTTCTCCTTCAACGAATTCTCCGGTAAATTGCCAGAATCAGGCCAATTTTCATTCTTTAACGCATCGTCGTTCGCGGGGAATCCTAAACTATGCGGCTCTCTATTGAACAATCCATGTAAATTGACAAGAATGAAATCCACACCAGGAAAAAATAATTCAGATTTCAAGCTGATATTCGCGCTTGGCCTATTGATGTGTTCATTAGTATTTGCTGTTGCAGCCATTATTAAGGCAAAGTCATTCAAAAAGAAAGGCCCTGGTTCTTGGAAGATGACTGCTTTTCAAAAGCTCGAATTCACGGTTTCAGACATCCTTGAATGCGTGAAAGACGGTAATGTTATTGGAAGAGGAGGTGCAGGGATTGTTTACCATGGAAAAATGCCAAATGGAATGGAAATAGCAGTGAAGAAGCTACTTGGGTTTGGTGCAAATAACCATGATCATGGTTTTAGAGCTGAAATTCAAACACTTGGAAACATTAGGCACAGGAACATAGTAAGGCTACTTGCATTCTGTTCAAACAAAGAAACAAATCTGCTTGTGTACGAATACATGAGAAATGGAAGCTTAGGTGAGACATTGCATGGGAAAAAAGGTGCATTCTTGAGTTGGAACTTTAGGTACAAAATTTCTATTGATTCGGCGAAAGGACTCTGCTACCTTCACCATGATTGTTCTCCTTTGATCCTCCATAGAGATGTGAAATCTAACAACATTTTGTTGAGTTCAAATTTCGAAGCACACGTGGCTGATTTTGGGCTGGCAAAGTTCTTGGTGGATGGTGCAGCAGCAGAGTGCATGTCTTCAATTGCAGGCTCGTATGGCTACATTGCACCAGAATATGCTTATACATTGAGGGTAGATGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTCCTATTAGAGCTTCTAACGGGGAGGAAACCAGTGGGGGATTTTGGAGAAGGTGTGGATCTTGTACAATGGTGCAAAAAAGCAACAAATGGACGAAGAGAAGAGGTTGTGAACATAATTGATTCAAGGCTCATGGTAGTGCCAAAAGAAGAAGCCATGCACATGTTCTTCATTGCCATGTTATGCTTAGAAGAGAACAGTGTGCAAAGACCAACCATGAGGGAAGTTGTTCAGATGCTTTCTGAATTTCCAAGACAATCATCTCATCAACAATCTACTTCTTCTTCTTCTTCTTCTAGTAATTCTTCTACTAATCCACCAACCAAAAAGTTAATTCAGAATGATAAATTACCTTGTCCTCCTACTTTTAAACAAGACCTTTTGGTTTAA 3024 0.3896 MIPLTLTVFTLFSVLFSSVFASSLLSDFHALVTLRQGFQFPNPVINTWNTSNFSSVCSWVGIQCHQGRVVSLDLTDLNLFGSVSPSISSLDRLSHLSLAGNNFTGTIHITNLTNLQFLNISNNQFSGHMDWNYSTMENLQVVDVYNNNFTSLLPLGILGLKNKLKHLDLSGNFFFGEIPKSYGNLVSLEYLSLAGNDISGKIPGELGNLSNLREIYLGYYNSYEGGIPVEFGRLTKLVHMDISSCDLDGSIPRELGNLKELNTLYLHINQLSGSIPKQLGNLTNLLYLDLSSNALTGEIPIEFINLNRLRLLNLFLNRLHGSIPDYIADFPDLDTLGLWMNNFTGEIPYKLGLNGKLQILDLSSNKLTGVIPPHLCSSSQLKILILLNNFLFGPIPEGLGTCYSLTRVRLGENYLNGSIPNGFLYLPKLNLAELKNNYLSGTLSENGNGSSKPVSLEQLDLSNNAFSGPLPYSLSNFTSLQILLLSGNQFSGPIPPSIGGLNQVLKLDLSRNSLSAEIPPEIGYCVHLTYLDMSQNNLSGSIPPLISNIRILNYLNLSRNHLNQSIPRSIGTMKSLTVADFSFNEFSGKLPESGQFSFFNASSFAGNPKLCGSLLNNPCKLTRMKSTPGKNNSDFKLIFALGLLMCSLVFAVAAIIKAKSFKKKGPGSWKMTAFQKLEFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGMEIAVKKLLGFGANNHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGETLHGKKGAFLSWNFRYKISIDSAKGLCYLHHDCSPLILHRDVKSNNILLSSNFEAHVADFGLAKFLVDGAAAECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRKPVGDFGEGVDLVQWCKKATNGRREEVVNIIDSRLMVVPKEEAMHMFFIAMLCLEENSVQRPTMREVVQMLSEFPRQSSHQQSTSSSSSSSNSSTNPPTKKLIQNDKLPCPPTFKQDLLV 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00032 1007 ProSiteProfiles Leucine-rich repeat profile. 527 549 IPR001611 GO:0005515
Mepo6g00032 1007 Pfam Leucine Rich repeat 282 298 IPR001611 GO:0005515
Mepo6g00032 1007 Pfam Leucine Rich repeat 525 540 IPR001611 GO:0005515
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 222 327 - -
Mepo6g00032 1007 Pfam Protein tyrosine and serine/threonine kinase 691 958 IPR001245 GO:0004672|GO:0006468
Mepo6g00032 1007 SUPERFAMILY Protein kinase-like (PK-like) 679 958 IPR011009 -
Mepo6g00032 1007 SUPERFAMILY RNI-like 71 416 - -
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 334 623 - -
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 975 - -
Mepo6g00032 1007 SUPERFAMILY L domain-like 355 612 - -
Mepo6g00032 1007 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
Mepo6g00032 1007 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mepo6g00032 1007 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00032 1007 Gene3D Transferase(Phosphotransferase) domain 1 765 984 - -
Mepo6g00032 1007 SMART serkin_6 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00032 1007 SMART LRR_typ_2 282 306 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 258 281 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 549 573 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 136 159 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 501 525 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 185 209 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 355 378 IPR003591 -
Mepo6g00032 1007 SMART LRR_typ_2 477 500 IPR003591 -
Mepo6g00032 1007 Pfam Leucine rich repeat 163 219 IPR001611 GO:0005515
Mepo6g00032 1007 Gene3D Ribonuclease Inhibitor 26 303 IPR032675 -
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 764 - -
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 134 221 - -
Mepo6g00032 1007 MobiDBLite consensus disorder prediction 961 999 - -
Mepo6g00032 1007 MobiDBLite consensus disorder prediction 961 989 - -
Mepo6g00032 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 230 959 - -
Mepo6g00032 1007 Gene3D Ribonuclease Inhibitor 305 626 IPR032675 -
Mepo6g00032 1007 Pfam Leucine Rich Repeat 356 376 IPR001611 GO:0005515
Mepo6g00032 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Mepo6g00032 1007 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 26 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00032 Mepo-Chr6 347014 351911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00032 21 977 Receptor kinase-like Gene Family AT5G65700 56.718 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo6g00032 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00032 - - tcc:18607145 1499.18