Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00027 ATGGAGAAAACAGGGGACGAATCTCCAAAGAATAAAGTAAAATTCCTTTGCAGTTATGGTGGAAAGGTTCTACCACGATCCTCCGATGGGGTCCTCAAGTATGTGGGCGGGGAGACTCGTGTCATTTGTGTCCCTCGCGACGTCACCTTCTCCGATATGATGAAAAAGGTGAGTGGCATGGTTGATGGAGAAGTGGTGTTAAAGTACCAGGTAATCCCTGAAGAGCTTGATGCATTGGTGTCCGTTAGAACAAATGAGGATCTGAAGCACATGATTGAGGAACATGATCGGCATGAGACCGGAGGAGCCCCATTGCTTCGCGCATTTTTATTTCCTTTGAAGCCACTTTTGGTCAACAGCCGTAATCAAATGCAAGGGCAACCACCAGGGCTACATCCACTATCTGTTGAACCATATTTGTTAGAGAAACGCTACATTGATGCCATCAATGGAATCGTCCGCACAAGCCCCAGGTCTAACTTTGCGCCACGCTCTGCATGTTCTTCACCAAAATCAATCTCCCCAGATAAGCATACGAACACAGACTCGCCCTTTCACCACGGTTTGCAGCAGTTGAAGGGTAGGGTTACAATACAAAGGGTGAGAAGCTCGCCCAGTTTATCTAATATTACAAACACCAACAATAATAGACAATCACCACCCCAACAGCGGCAGCAACAGCAGCACGATCATGGTATTAGTAGTAGTAGTCATTATCACCCATTCAGACCCATACAAGAACAAGGGATAAGCATGGGGATGGGAAGGTTATCTCCAATGAATATGAATATGAACATGATGACAGATAATAATATGAGTAGCAGCAGTAGGGGTATTAATTACTGTTACTCCACGGCAAACAGACCACATAAAGCGTATGCATACCAGGATGACTCTGTTGGTCATATTAAGTTTGAAAGAGTTCAATCCGTCCCCCGAAGTCCCAGAATGTCTATATGGGAATGA 966 0.4513 MEKTGDESPKNKVKFLCSYGGKVLPRSSDGVLKYVGGETRVICVPRDVTFSDMMKKVSGMVDGEVVLKYQVIPEELDALVSVRTNEDLKHMIEEHDRHETGGAPLLRAFLFPLKPLLVNSRNQMQGQPPGLHPLSVEPYLLEKRYIDAINGIVRTSPRSNFAPRSACSSPKSISPDKHTNTDSPFHHGLQQLKGRVTIQRVRSSPSLSNITNTNNNRQSPPQQRQQQQHDHGISSSSHYHPFRPIQEQGISMGMGRLSPMNMNMNMMTDNNMSSSSRGINYCYSTANRPHKAYAYQDDSVGHIKFERVQSVPRSPRMSIWE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00027 321 SUPERFAMILY CAD & PB1 domains 28 116 - -
Mepo6g00027 321 SMART PB1_new 27 113 IPR000270 GO:0005515
Mepo6g00027 321 MobiDBLite consensus disorder prediction 157 187 - -
Mepo6g00027 321 MobiDBLite consensus disorder prediction 157 241 - -
Mepo6g00027 321 Gene3D - 33 111 - -
Mepo6g00027 321 MobiDBLite consensus disorder prediction 196 241 - -
Mepo6g00027 321 Pfam PB1 domain 32 112 IPR000270 GO:0005515
Mepo6g00027 321 CDD PB1_UP2 16 111 - -
Mepo6g00027 321 PANTHER OS05G0427100 PROTEIN-RELATED 5 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00027 Mepo-Chr6 298707 299774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00027 6 153 MAP Kinase Kinase Kinase AT3G46920 39.073 7.95e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00027 - - tpra:123910761 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00027 6 298707 299774 Mepo6g00027 6 298707 299774 ECH