Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00025 ATGGCGTCTGCTAGCCTTGGAAATGGCGGTATTGGCAGCAGTTCAAGGTCTGCTGCTGCCTTAAGAGCTGCTTCTTCCACTTCTTCTTCCGTCGATTGGCTTGGCAGAGAAATGCTTCACATGAACCTCAATCGTGATCATGACCACGACGACGACGACGACGATGATGCCAGAGATAGTGAGCCTGACATCATTGACGGTGTTGGTGCTGAAACTGGACATGTTATAAGAACAAGCATCGCTGCACGAAACGGTCAATCCAAGCAGAATGTTAGTTATATTGCGGAGCACGTAGTTGGGACAGGCTCTTTTGGAACTGTTTTTCAAGCTAAATGTAGAGAAACAGGAGAGATTGTTGCCATCAAGAAGGTTCTCCAGGACAAGCGTTACAAGAACAGAGAGTTACAGATTATGCAAATGCTCGACCATCCAAATATTGTCGCCCTCAGGCATTGTTTCTTTTCAACCACTGACAAGGAGGAGCTTTACTTGAATCTTGTGCTTGAATATGTTCCTGAAACCGTCAATCGTATTGCAAGAAACTATAGCAGGATTAACCAGCGAATGCCTTTGATATACGTGAAACTTTATACGTACCAGATATGCAGGGCCCTTGCTTACATACATAACTGCATTGGCATCTGTCATCGTGACATCAAACCTCAGAACCTACTTGTGAACCCGCACACCCATCAGCTGAAACTATGTGATTTTGGGAGTGCAAAAGTGTTGGTGAAAGGAGAACCTAATGTTTCATATATCTGTTCAAGATACTATCGTGCCCCAGAACTTATATTTGGTGCCACTGAATATACAACTGCCATAGATATATGGTCAACTGGTTGTGTAATGGCCGAATTACTTCTTGGTCAGCCCTTGTTTCCTGGAGAGAGTGGAGTTGATCAGCTAGTTGAAATCATCAAGGTTTTGGGAACTCCTACCAGGGAGGAGATTAAGTGCATGAACCCAAATTATACTGAATTTAAGTTTCCGCAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTGCCCCCAGAAGCAGTTGATCTTGTCTGTAGGTTCTTTCAGTACTCTCCTAATTTGAGATGCACTGCTTTGGAAGCTTGCATTCACCCCTTCTTTGATGAATTAAGGGACCCAAACACCCGCCTTCCCAATGGTCGTCCATTGCCTCCGCTGTTTAATTTTAAACCCCAGGAACTTTCTGGTATTCCACCTGATGTCATCAACCGGCTTATTCCAGAACATGCTCGCAAACAGAATTTATTTATGGCTTTGCACACCTAG 1296 0.4414 MASASLGNGGIGSSSRSAAALRAASSTSSSVDWLGREMLHMNLNRDHDHDDDDDDDARDSEPDIIDGVGAETGHVIRTSIAARNGQSKQNVSYIAEHVVGTGSFGTVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPDVINRLIPEHARKQNLFMALHT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00025 431 ProSiteProfiles Protein kinase domain profile. 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00025 431 FunFam Shaggy-related protein kinase kappa 173 421 - -
Mepo6g00025 431 MobiDBLite consensus disorder prediction 44 68 - -
Mepo6g00025 431 Pfam Protein kinase domain 95 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00025 431 ProSitePatterns Protein kinases ATP-binding region signature. 99 123 IPR017441 GO:0005524
Mepo6g00025 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mepo6g00025 431 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 61 423 - -
Mepo6g00025 431 CDD STKc_GSK3 88 380 IPR039192 -
Mepo6g00025 431 SUPERFAMILY Protein kinase-like (PK-like) 92 404 IPR011009 -
Mepo6g00025 431 SMART serkin_6 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00025 431 Gene3D Phosphorylase Kinase; domain 1 78 172 - -
Mepo6g00025 431 FunFam Glycogen synthase kinase-3 beta 77 172 - -
Mepo6g00025 431 Gene3D Transferase(Phosphotransferase) domain 1 173 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00025 Mepo-Chr6 286856 293434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00025 99 385 Core Cell Cycle Gene Families AT1G76540 35.452 1.75e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mepo6g00025 Pkinase 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00025 K03083 - gmx:100799387 781.171