Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00024 ATGACTTCCAGATTCTTTTACCAGGGTGGTGATCATAGTGATACCGACGATGAACCCACTGATATTGATGATGATGAACCCAGTGATACTGAACCCGCTCCAACAGACCCAAACGGTAAAAGCAAATACTACGTTGATGGTAATGCTGATGACAGTGACGACGATGATGGCCAAAAGCGTGTTGTTAAGTCTGCTAAAGATAAGCGTTTTGATGAGATGGCTTCCACTGTTGATCAGATCAAGAATGCCATCAAGATCAATGACTGGGTCAGCTTGCAAGAGAGCTTTGACAAGATCAACAAACAGCTCGAGAAAGTTATGCGTGTTATCGAGTCCCAAAAGATCCCCAATCTCTACATCAAGGCTCTTGTAATGCTTGAAGATTTCCTCTCTCAAGCTTCTGCTAATAAGGATGCCAAAAAGAAGATGAGTCCTAGCAATGCCAAAGCCTTCAACTCAATGAAACAGAAATTGAAGAAGAACAATAAGCAATACGAGGACTCGATTATCAAATGCAGGGAGAGTCCTGAGAGTGAGGGGGAAAAGGATGACGAGGATGAGGACTCTGACGAATACGAGACCGATGATGACATCATTGAACCTGATCAGCTCAGGAAGCCCGAGCCTGTATCGGATTCTGAAACTTCTGAGTTTGGTAATGACAGGCCTGGTGATGATGGCGATGCTCCTTGGGATCAAAAGCTTAGCAAGAAAGACAGGCTTTTGGAGAAAATGTTCATGAAAAAGCCTAGTGAGATCACATGGGACACTGTTAACAAGAAGTTCAAAGAGATTCTGGAAGCCAGGGGCAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAACTTACCTTCCTAACAAAAGTTGCTAAAACACCTGCTCAGAAGCTGCAAATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAGTGGGCATATGCCCATAAATGTGTGGAAAAAATGCGTGCAGAATATGCTGGTCATTCTTGATATTCTCGTGCAGCACCCAAACATTAAGGTTGATGATTCTGTGGAACTAGATGAGAATGAAACTAAGAAAGGGGATGACTATGACGGACCCATTCATGTCTGGGGCAACTTAGTTGCTTTCTTAGAAAAAATAGATGCAGAGTTTTTCAAGAGCTTGCAGTGCATTGATCCCCATACACGTGAATATGTTGAGAGACTCAGGGATGAGCCTCAGTTTGTTGTTCTTGCACAGAATGTCCAGGAATATCTTGAAAGCATTGGAGATTTCAAAGCTTCTTCTAAGGTAGCCTTGAAGAGGGTTGAACTCATTTACTACAAACCACATGAGGTTTATGAAGCAACGAGAAAATTGGCTGAGATGACCGTAGAGGGAGATAATGGAGAGATGAGTGAGGAGTTAAAAGGTTTTGAGGATACAAGAATTCCTGCTCCGTTTGTTGTTACCCCGGAACTTGTGGCACGGAAACCCACCTTCCCAGAAAATAGCAGGACCTTAATGGATGTGTTAGTATCACTGATATACAAATATGGAGATGAGCGCACTAAAGCACGCGCAATGCTTTGTGATATATACCACCATGCTCTTCTTGATGAGTTTGCAGTCGCCCGTGATCTGTTGCTTATGAGTCATTTGCAAGAAAATGTTCACCACATGGACATTTCGACACAGATACTTTTTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGGGTTGGGCTGGTTTCTGAAGCACATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTGAAGGAATTGCTTGCGCAAGGAGTTTCACAGAGCCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAAGTTCCTAACATGGCAGCCAATGTTCATGATGGTAAGCGTAAGATCATCAGTAAGAATTTCCGCCGCTTACTTGAGGTCAGTGAGAAACAAACATTCACCGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGAGATTTCCAGAAGGCCTTTGACATTATTGCATCTCTTGAGGTGTGGAAATTTGTGAAAAATCGTGACACTGTGCTAGAAATGCTGAATGACAAAATCAAGGAGGAGGCGCTTAGGACATACCTATTCACTTTCTCTTCATCATATGTTTCTTTGAGTGTGGATCAGCTCACAAATTTTTTTGATCTCTCTCTTCCTCGTGTTCATAGTATTGTCAGTAGGATGATGATCAACGAGCAGCTTCATGCAAGCTGGGATCAGCCAACTGGGTGCATTATTTTCAGAAATGTTGAACTCTCAAGGGTGCAGGCTTTGGCATTCCAGTTGACTGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGTGGTGGGTTGGATCTGCCACCAAGGCGGAGAGATGGGCAGGATTATGCCGCTGCAGCTGCTGGTGGTGGTAGTGGAACGTCTTCGGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGGCAAGGCAGTGGACGTACGGGATACAGTGGAGGAAGAGCATTATCGTTCAGTCAAGCTGGTGGGAGTGGCGGCTATTCTAGAGGACGGGGAACGGGTGGAGGCGGCTATCAGAATTCAGGGAGGACTCAAGGGGGTTCAACATTGAGGGGACCCCACGTAGATACTTCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTGA 2811 0.4472 MTSRFFYQGGDHSDTDDEPTDIDDDEPSDTEPAPTDPNGKSKYYVDGNADDSDDDDGQKRVVKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLEKVMRVIESQKIPNLYIKALVMLEDFLSQASANKDAKKKMSPSNAKAFNSMKQKLKKNNKQYEDSIIKCRESPESEGEKDDEDEDSDEYETDDDIIEPDQLRKPEPVSDSETSEFGNDRPGDDGDAPWDQKLSKKDRLLEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDDYDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPQFVVLAQNVQEYLESIGDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVEGDNGEMSEELKGFEDTRIPAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDGKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLEVWKFVKNRDTVLEMLNDKIKEEALRTYLFTFSSSYVSLSVDQLTNFFDLSLPRVHSIVSRMMINEQLHASWDQPTGCIIFRNVELSRVQALAFQLTEKLSILAESNERATEARLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYSGGRALSFSQAGGSGGYSRGRGTGGGGYQNSGRTQGGSTLRGPHVDTSTRMVSLRGVRA 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00024 936 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 44 656 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo6g00024 936 Coils Coil 148 175 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 1 66 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 136 233 - -
Mepo6g00024 936 Pfam PCI domain 665 793 IPR000717 -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 854 893 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 16 31 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 137 158 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 218 233 - -
Mepo6g00024 936 SUPERFAMILY "Winged helix" DNA-binding domain 722 795 IPR036390 -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 901 923 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 824 936 - -
Mepo6g00024 936 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 3 876 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo6g00024 936 MobiDBLite consensus disorder prediction 159 178 - -
Mepo6g00024 936 MobiDBLite consensus disorder prediction 179 198 - -
Mepo6g00024 936 ProSiteProfiles PCI domain profile. 625 797 IPR000717 -
Mepo6g00024 936 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 931 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo6g00024 936 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 726 814 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00024 Mepo-Chr6 270599 284594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00024 1 936 Eukaryotic Initiation Factors Gene Family AT3G56150 65.823 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00024 K03252 - gmx:100805203 1387.09