Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00021 ATGGCGGCCTTGATCCTTCACGCTCCCAACAACGGAAACAAAAATGTTTACAAAACTCTGATTGCTGCTGAATATGTTGGTGTTCAAGTTCAATCGACTCCTGATTTTCAGATGGGTGTTTCCAACAAAACCCCTCAATTTATCAACATGAACCCTATTGGAAAGGTTCCGGTCTTGGAAACTCCCAATGGTCCTGTCTTTGAGAGTAATGCCATTGCTCGCTATGTTTCCCGATTGGGTCAAAACAACTTGTTTGGATCATCTCTCATTCATCAGGCCCAAATTGATCAGTGGATTGATTTTTCTTCTCTGGAGATTGATGCCAATATTATGAAGTTGTACCTGCCAAGACTTGGTTTTGCCACCTACTTTCCTCCAGTAGAGGAGAATGCAATTTCTTCACTGAAGAGAGCACTTGAGGCATTGAACACTCATCTTGCTCACAATACCTACTTGGTTGGGCATTCTGTTACCCTTGCTGACATTATAACAACATCCAACTTGTATATTGGTTTCGCTAAACTCTTGGTTAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCCAATTTTCGAAAGATATTAGGCCAGGTTAAGCAGACTGAGGCTATGCCACCTATTCCATCTGCTAAGAAGCCCACCCAGCAGCCTAAGGAATCTAAGCCCAAAACCAAAGATGAACCAAAGAAAGTGGCCGAAAAGCCCAAAGTAGAAGAAGTTGAAGAGGAGGCACCCAAGCCCAAACCCAAGAACCCTCTTGACCTTCTTCCTCCAAGTAAGATGATTTTGGATGACTGGAAAAGACTCTACTCTAACACTAAGAGGAACTTCCGTGAGGTCGCAATCAAAGGATTTTGGGACATGTATGATCCAGAGGGATACTCTCTCTGGTTTTGTGATTACAAATACAATGATGAGAACACTGTTTCTTTTGTGACGCTGAATAAGGTTGGTGGATTTCTGCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTATAGTTGGATCAGAGCCTCCATTTAAGGTGAAGGGTTTGTGGCTTTTCCGTGGACAAGAGATTCCAAAATTTGTCATGGATGAATGCTATGACATGGAGCTGTATGAGTGGACCAAGGTTGACATCTCTGATGAAGTTCAGAAAGAGCGTGCCAGTCAGATGATTGAAGATGCTGAACCATTTGAGGGAGAGGCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1257 0.4328 MAALILHAPNNGNKNVYKTLIAAEYVGVQVQSTPDFQMGVSNKTPQFINMNPIGKVPVLETPNGPVFESNAIARYVSRLGQNNLFGSSLIHQAQIDQWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNTHLAHNTYLVGHSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAMPPIPSAKKPTQQPKESKPKTKDEPKKVAEKPKVEEVEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKRNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIVGSEPPFKVKGLWLFRGQEIPKFVMDECYDMELYEWTKVDISDEVQKERASQMIEDAEPFEGEALLDAKCFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00021 418 SFLD Main (cytGST) 15 191 - -
Mepo6g00021 418 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Mepo6g00021 418 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
Mepo6g00021 418 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Mepo6g00021 418 MobiDBLite consensus disorder prediction 225 258 - -
Mepo6g00021 418 Pfam Glutathione S-transferase, N-terminal domain 13 78 IPR004045 -
Mepo6g00021 418 SFLD Glutathione Transferase (cytosolic) 15 191 IPR040079 -
Mepo6g00021 418 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 258 418 IPR036433 GO:0003746|GO:0006414
Mepo6g00021 418 FunFam Elongation factor 1-gamma 1 258 418 - -
Mepo6g00021 418 Pfam Glutathione S-transferase, C-terminal domain 129 198 IPR004046 -
Mepo6g00021 418 SUPERFAMILY Thioredoxin-like 12 78 IPR036249 -
Mepo6g00021 418 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 258 418 IPR001662 GO:0003746|GO:0006414
Mepo6g00021 418 SMART EF1G_2 257 365 IPR001662 GO:0003746|GO:0006414
Mepo6g00021 418 SUPERFAMILY eEF1-gamma domain 258 418 IPR036433 GO:0003746|GO:0006414
Mepo6g00021 418 MobiDBLite consensus disorder prediction 212 265 - -
Mepo6g00021 418 Gene3D - 81 215 - -
Mepo6g00021 418 FunFam Elongation factor 1B gamma 2 76 - -
Mepo6g00021 418 CDD GST_C_EF1Bgamma_like 92 213 - -
Mepo6g00021 418 CDD GST_N_EF1Bgamma 12 79 - -
Mepo6g00021 418 Pfam Elongation factor 1 gamma, conserved domain 257 365 IPR001662 GO:0003746|GO:0006414
Mepo6g00021 418 FunFam Elongation factor 1 gamma 81 216 - -
Mepo6g00021 418 Gene3D Glutaredoxin 1 76 - -
Mepo6g00021 418 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 3 418 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00021 Mepo-Chr6 252188 255161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00021 3 418 Eukaryotic Initiation Factors Gene Family AT1G57720 74.940 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00021 K03233 - gmx:100787125 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00021 6 252188 255161 Mepo6g00021 6 252188 255161 ECH