Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00017 ATGTCTAATGTCTTGTCTAATTTTTCTATTCACTGCTTTCCTTTTGCTTCTTTTTATTTTCCCATTGTGTTAGTATATTTTTTTTTTATCATGCTGCAGATCAAGTGTTTTATGCCACAGCTTCTTTGTGGTCTTGAACATTGTCACAGTCGCGGTGTTATGTATCGTGACATCAAGGGCTCAAATCTTCTGCTTGACAATAATGGCAATCTGAAGATTGCTGATTTTGGGCTTGCAACTTTGTTTCAGCCATCTCAAGGGCCGCCTTTAACAAGTCGTGTAGTAACCTTGTGGTACCGACCACCTGAACTTTTACTTGGAGCTACAGATTATGGAGCCTCTGTGGATTTGTGGATTTGTGGTTGCATTCTTGCAGAAATGTTCACCAGGAAGCCTATAATGCCTGGACGAACTGAGGTGGAGCAACTGCATACAATCTTCAAGCTCTGTGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCGACAATTTTTAAACCTCAACAACCTTATAAACGTGTTGTTTCTGAGACATTCAAGATTTTTCCTTCATCGGCACTGAGCCTCTTGGAAGTCTTACTTGCTATTGAACCAAAAGACCGAGGAACTGCATCTTCAGCACTTCAGAATGAGTTCTTCACATCATAG 660 0.4076 MSNVLSNFSIHCFPFASFYFPIVLVYFFFIMLQIKCFMPQLLCGLEHCHSRGVMYRDIKGSNLLLDNNGNLKIADFGLATLFQPSQGPPLTSRVVTLWYRPPELLLGATDYGASVDLWICGCILAEMFTRKPIMPGRTEVEQLHTIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKRVVSETFKIFPSSALSLLEVLLAIEPKDRGTASSALQNEFFTS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00017 219 PANTHER CELL DIVISION PROTEIN KINASE 32 217 - -
Mepo6g00017 219 SUPERFAMILY Protein kinase-like (PK-like) 31 218 IPR011009 -
Mepo6g00017 219 FunFam Mitogen-activated protein kinase 31 219 - -
Mepo6g00017 219 Gene3D Transferase(Phosphotransferase) domain 1 29 219 - -
Mepo6g00017 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Mepo6g00017 219 Pfam Protein kinase domain 33 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00017 219 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00017 219 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00017 Mepo-Chr6 236746 238266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00017 29 217 Core Cell Cycle Gene Families AT5G10270 55.789 3.95e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo6g00017 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00017 - - cam:101495256 331.643