Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00016 ATGGCGAAAGGGGATCCCTTGTTGTTGCTGGCTGGCCTTCTTGGCTCACTGCTGTCGCCGCTGAAGCCATCGCTGGCTGGATACCTTGCAAAGCTGACTCTTTTCACAAATTGGACAAGGCAGATTGGTCAAGGAACTTACACCACTGTTTACAGTGCTCGTGATCTTCAAACTAACAAAATTGTTGCTTTGAAGAAAGTTAAATTCGCTAATATGGATCCTCAAAGTGTCCGTTTTATGGCTAGAGAAATTATTCTCCTTCGAAGGCTTCATCATCCAAATGTCATCAAACTTGAGGATCATAACTTCAACCCTTTCTGCTACCTTGTACCTTATTTTTGA 342 0.4298 MAKGDPLLLLAGLLGSLLSPLKPSLAGYLAKLTLFTNWTRQIGQGTYTTVYSARDLQTNKIVALKKVKFANMDPQSVRFMAREIILLRRLHHPNVIKLEDHNFNPFCYLVPYF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00016 113 PANTHER CELL DIVISION PROTEIN KINASE 39 101 - -
Mepo6g00016 113 Gene3D Phosphorylase Kinase; domain 1 34 107 - -
Mepo6g00016 113 SUPERFAMILY Protein kinase-like (PK-like) 39 105 IPR011009 -
Mepo6g00016 113 ProSiteProfiles Protein kinase domain profile. 36 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00016 113 Pfam Protein kinase domain 39 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00016 Mepo-Chr6 236011 236423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00016 40 100 Core Cell Cycle Gene Families AT3G48750 44.262 2.25e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo6g00016 Pkinase 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00016 - - mtr:25485879 104.76