Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00013 ATGGACATGATGGAGTCACTAACAGAGGAAAGGATGATTGAGATAAGAGATGATGAACACAAACAGCCGTTACTCCTCAGAAGCAGAATTAATACCTCTTCTCAACTCGCTATCGTTGGAGCCAATATTTGCCCTATTCAGAGTCTTGATTACGAGTTAATTGAGAATGATCTATTGAAACAGGACTGGAGGTCAAGAACAAAGGTTGAGATATACCAATATGTTGTTCTGAAGTGGACCCTTGCACTTCTTATTGGTTTAATCACAGGACTTGTTGGGTTCTTTAATAACCTTGGAGTTGAGAATATTGCTGGTTTCAAACTTCTACTCACCAACAATCTCATGCTCAAGCAAAAGTATCATGAGGCATTTGCAGTGTATGTTGGTTGTAACATGATTTTAGGGGTTGGTGCTGCAGCCCTGTGTGCTTACATTGCTCCTGCAGCTGCTGGCTCTGGCATACCAGAGGTGAAGGCATACCTCAACGGCATTGATGCACATTCTATATTGGCCCCATCTACCCTCTTTGTCAAGATATTTGGTTCGATTTTAGGAGTTGCTGCTGGTTTCATTGTGGGGAAAGAAGGACCCATGGTTCATACAGGTGCCTGCATTGCTAATTTACTCGGACAAGGTGGTTCGCGTAAATATCGACTCACCTGGAAATGGCTCAGATACTTCAAAAATGATAGAGATAGGAGGGATTTGATCACGTGCGGTGCAGCTGCTGGTGTTGCCGCTGCCTTCCGTGCCCCCGTTGGTGGTGTTCTGTTCGCACTCGAAGAGGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGCACATTCTTTACCACTGCAGCAGTAGCAGTTGTTTTGAGGAGTCTTATGCAATTCTGTCATCAGGGAGGAGGCAGATGTGGTCTGTTTGGAGAAGGGGGACTCATCATGTTTGATGTTAATTCTGCAAAGCCTGCCTACACCACACCTGACCTTCTCGCAGTTATATTTCTTGGAGTCATTGGAGGTTTCATGGGAAGCCTTTACAATTATCTTGTCGATAAAGTCCTTCGCACTTACGGCGCTATAAATGAGAGAGGTCCAATATTCAAGATTCTACTGGTGATGATTATCTCGTTTGTAACCTCCTGTATTCGATTTGGGCTTCCATTGCTATCAAAGTGTGTGCCATGTCCAGGGGAGTGTCCCAGCTCCCCAACCGGAGGCTTCTCAATACACTACGACAATTTTCAGTGTCCACCAAACCACTACAATGATCTCAGCTCTCTCTTTTTCACTACCAACGACGATGCCATCCGCAGCCTATTCAATGATGGCTCTGCCTCTGCTAACGCCGGATTTCAGCTATCAAGTCTCATAGTTTTCTTCGTGGCAATATACTTGCTTGGAATTGTGACATACGGTGTTGCCATTCCCTCTGGACTCTTCATTCCCGTCATACTTGCCGGAGCTTCTTACGGGCGTCTTATAGGGACTGTGATGGCTCCATTCACAGCTCTTGATACGGGTTTGTTTGCTCTCCTTGGAGCCGCATCTTTCCTTGGTGGCACCATGAGAATGACAGTTTCTCTCTGTGTCATACTTCTTGAACTCACTAATAACTTGTTGATGCTACCATTGGTCATGTTGGTTCTCCTCATTTCTAAGACAGTGGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTAGCGTTGAAGGGACTACCTTATATGGAAGCACATGCAGAGCCATACATGAGGAACTTAGTGGCAGGGGATGTTGTTTCTGGTCCACTGTTTTCTTTTTGTGGGATCGAAAAAGTGGGGAATATATTGCACGCTTTGAAAGTGACAGAACATCACGGATTTCCAGTAGTTGATGAGCCTCCTTTGACGGATGCTCCCGAGTTGTGCGGGTTGGTGTTGAGGTCTCATCTTTTGGTGCTTCTCAAGCACAAGACATTGTTCACTAGGGAGAGGGTGATGACAGGGTCTACAATTACGAACAAGGTTAAGGCAAGGGATTTTGCAAAACCAGGTTTGGGAAGAGGGATAAGGGTGGAGGATTTGGACATTTCACAAGAGGAGATGGAAATGTTTGTTGATCTTCATCCAATCACAAATACTTCTCCATATACTGTTGTTGAAACAATGTCTCTTGCAAAAGCTGCTCTTCTTTTTCGGGAGCTTGGACTCAGGCATTTGCTAGTTGTGCCTAAGAAACCAGGAAGGCCTCCAATTGTTGGGATCCTGACAAGGCATGATTTCATGCACGACTATATCTTGGGTCTATTCCCCAACTTGAATCCCCGCAAGTAG 2301 0.4515 MDMMESLTEERMIEIRDDEHKQPLLLRSRINTSSQLAIVGANICPIQSLDYELIENDLLKQDWRSRTKVEIYQYVVLKWTLALLIGLITGLVGFFNNLGVENIAGFKLLLTNNLMLKQKYHEAFAVYVGCNMILGVGAAALCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVAAGFIVGKEGPMVHTGACIANLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAAVAVVLRSLMQFCHQGGGRCGLFGEGGLIMFDVNSAKPAYTTPDLLAVIFLGVIGGFMGSLYNYLVDKVLRTYGAINERGPIFKILLVMIISFVTSCIRFGLPLLSKCVPCPGECPSSPTGGFSIHYDNFQCPPNHYNDLSSLFFTTNDDAIRSLFNDGSASANAGFQLSSLIVFFVAIYLLGIVTYGVAIPSGLFIPVILAGASYGRLIGTVMAPFTALDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNKGVYDQIVALKGLPYMEAHAEPYMRNLVAGDVVSGPLFSFCGIEKVGNILHALKVTEHHGFPVVDEPPLTDAPELCGLVLRSHLLVLLKHKTLFTRERVMTGSTITNKVKARDFAKPGLGRGIRVEDLDISQEEMEMFVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKKPGRPPIVGILTRHDFMHDYILGLFPNLNPRK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00013 766 CDD CBS_pair_voltage-gated_CLC_euk_bac 575 753 - -
Mepo6g00013 766 ProSiteProfiles CBS domain profile. 700 761 IPR000644 -
Mepo6g00013 766 PRINTS Plant CLC chloride channel signature 263 271 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo6g00013 766 PRINTS Plant CLC chloride channel signature 277 287 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo6g00013 766 PRINTS Plant CLC chloride channel signature 52 60 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo6g00013 766 PRINTS Plant CLC chloride channel signature 420 436 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mepo6g00013 766 FunFam Chloride channel ClC3 70 388 - -
Mepo6g00013 766 Pfam Voltage gated chloride channel 135 553 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 17 756 - -
Mepo6g00013 766 Gene3D Clc chloride channel 70 572 - -
Mepo6g00013 766 SUPERFAMILY CBS-domain pair 576 752 IPR046342 -
Mepo6g00013 766 PRINTS Chloride channel signature 178 197 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 521 540 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 147 164 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 503 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 471 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 242 261 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 PRINTS Chloride channel signature 559 573 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mepo6g00013 766 Gene3D - 573 753 IPR046342 -
Mepo6g00013 766 SUPERFAMILY Clc chloride channel 56 574 IPR014743 -
Mepo6g00013 766 CDD ClC_6_like 47 572 - -
Mepo6g00013 766 Pfam CBS domain 702 751 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00013 Mepo-Chr6 210526 215592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00013 9 766 Ion Channels AT5G49890 74.804 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00013 K05016 - jre:108988922 1118.61