Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00010 ATGTGTGGAATAATAAAAGGGAGTGAATGGATGAAGGGTAAAATGGTTGGATGTGGATCTTTTGGCAGTGTCCATCTAGCCATGAACAAATCCACCGGTGGACTTTTTGTGGTGAAAACAGCGCATTCAGAGGCAGGACGTGATGCTCTGGAGAACGAGGTGAATATCCTAAATACATTAAATTCATCACCTTCACCCTATATTCTCCAATGTTTAGGGACAGATTATGATCATCAAGATAACCAACTGCATGTTTTCATGGAGTATATGTCCGGGGGTAGTTTGGCTGATGTGTCACACAAGTTTGGTGGTTCATTAGATGAAGATGTTGTTCGTGTGTATACTAGACAAATTGTGCATGGGTTATATCATCTTCACCAACATGGAATTGTACATTGTGACCTTAAGTGCAAAAACGTGCTTTTGGCTTCATCTGGGAATGTCAAACTTGCAGATTTTGGGTGTGCAAAAAGGATCAAGAAAAACTTGAACATGAACAAATCTTCATCATGTATTATTGCTAATGGTGGCACTCCTCTATGGATGGCTCCCGAAGTATTATTAATGAAGAATAATAGTAGTATTAATGATGAGAGCTGGGTTGTTGATTTTGCAGCAGCAGATATATGGTCTTTGGGATGTACTGTTATTGAAATGGCCACTGGCAGGCCTCCTTGGGTCGACGATGACCTCATTTCCAATTCAAATCCAATGGCTGCTATGTTTAAGATTGCATGTGGTGATGGGATACCTCAATTTCCAATTCATTTCTCTCAGGAGGGTTTCGATTTCTTGAGGAGGTGTTTGGTGAGAGATCCCAAAAAGAGATCTACCACACAGGAGTTGCTTAACCATCCATTTCTTGTTTCCACTACTTTAACTCGTCACAAACACTACTCTGCTTCCTCGCCCGCATCTGTCTTGGAGGTTCATCAGTTTGAGGATACATATGATGATGATGATGATGATGATGACGACGACGACGACTCAGATGATAATGATGAATTAATAAGTCCAGCAGGAGGGAATCATTTCTCCATCACAAAAGAGTTTCTGTGCTCACAAGGAACAACAATGTGGCAACTGGAAGACAGTGCATCAGGGAATCATTGGATCACTATTAGATCAAGGTGA 1134 0.4109 MCGIIKGSEWMKGKMVGCGSFGSVHLAMNKSTGGLFVVKTAHSEAGRDALENEVNILNTLNSSPSPYILQCLGTDYDHQDNQLHVFMEYMSGGSLADVSHKFGGSLDEDVVRVYTRQIVHGLYHLHQHGIVHCDLKCKNVLLASSGNVKLADFGCAKRIKKNLNMNKSSSCIIANGGTPLWMAPEVLLMKNNSSINDESWVVDFAAADIWSLGCTVIEMATGRPPWVDDDLISNSNPMAAMFKIACGDGIPQFPIHFSQEGFDFLRRCLVRDPKKRSTTQELLNHPFLVSTTLTRHKHYSASSPASVLEVHQFEDTYDDDDDDDDDDDDSDDNDELISPAGGNHFSITKEFLCSQGTTMWQLEDSASGNHWITIRSR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00010 377 SMART serkin_6 10 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00010 377 MobiDBLite consensus disorder prediction 316 342 - -
Mepo6g00010 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mepo6g00010 377 CDD STKc_MAPKKK 9 288 - -
Mepo6g00010 377 MobiDBLite consensus disorder prediction 316 335 - -
Mepo6g00010 377 Pfam Protein kinase domain 12 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00010 377 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 9 329 - -
Mepo6g00010 377 ProSiteProfiles Protein kinase domain profile. 10 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00010 377 SUPERFAMILY Protein kinase-like (PK-like) 8 316 IPR011009 -
Mepo6g00010 377 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mepo6g00010 377 Gene3D Transferase(Phosphotransferase) domain 1 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00010 Mepo-Chr6 178880 180141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00010 10 288 MAP Kinase Kinase Kinase AT5G55090 41.135 4.45e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo6g00010 Pkinase 7.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00010 - K20716 psat:127086258 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00010 6 178880 180141 Mepo6g00010 6 178880 180141 ECH