Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00005 ATGGCAAACAAGTTCACCCCCATTTCAGCCATCTCTGGTGGTAAGAAAGATTTAAAGTTGATTGTTCGTGTTGCTCATATTTGGCTAATTCGTGACAAGGAAAATCCAGATGACATAATTTTCATGAACATGATGCTGGTTGATGATAAGCGAGGAAGGATACATGCTACTGTTCGTAAATACTTGGTGCCAAGTATTCAAAAAATGGTCGAAGAAGGCGGCACTTATAAGCTAGAGAATGTAATGGTTGGATTTAACGAGGGGCAGTACAAGCTTTTGCCTCACAAGCACAAGCTTAGCATGATGAACAATTCCAGATTTGTTAAGGTGAATGCACCCAATATTCCTCTGAACGTCTTTGAGTTTATGGCCTTCAAAGACATTTTACTTTCTCAAGAGGATGATAAAGTTGCTGATGTAATCGGTCATGTCGTTGAGAGGGATATTTTAAGGGAAACCGAAAAGAATGGAAGAAAAAGCATAGTAATTGATCTTACGCTAGAAGATTTGGAACACTCTAGGATTCATTGCTCCCTTTGGGGTGAATTTGCAACTGATATTGATAAGTATTTTGATGCTCAAGATAACTCTAAGCCTGTTGTATTGATAATACAACTTGGCCGATTGAGGAAGTATATGAGTGCCATGGGGATCGCGAATTCATTTTATGGCTCAAAGGTCATAATAAATGGTGATCTTCCTGAGGTTTCTGACTACATTAAAAGGATGGGGAATGTTGATGTTGAACTAACACAAAGTGTTAGTCAGATGTCCTCATACAGTGCACGCCCTGTCGCTGAGGAGCTTCTTGATTGCAATCGAATGACAATCGAGGATCTTATAGAGTCCAAAGCGGCATGTAATGGATCAGTACTTGCTACCATATGTGAGATTGAAACCGGTGTCGAGTGGTTTTTCCGTTCATGCACTGTGTGTGCGTCGTTAGTCAGCCTGATTGATGGAAAACTTAGTTGCAAACGATGCAAGGAGTGCAAAAGTGCCGTTCCAAGGTTCAAGCTGCATTTAATTGTCATGGATGAGAGTGGGTCGACAACGTTTGTCCTCTTTGATCGTGTTGTCACACAATTCATTGGAAGGAACGTCCAAGACTTGATTGCAGAAATGAACAAGCCTGACAACAAAGATGTGTATCCGCTTGAGTTCAACTTCTTTGTGGACAAAAAAATGATGTTTAAGGTGGAAGTTAGTGATGGCAATGTCAATAGGAAGTGGAGAAACTATGGAGTGAAAAAAGCTACTGATGATGTTGAAATCATTGATGAGTTTATCAAGAAGTATAGTAGTAAGTTTTCTAATGAGGGAGATCAAGTTGAAACTGCACCTGAGAATACCGCTCTTGGAAGTGATGCTAATAATTTGGAAATATTGGAGTTAGGTGATTCTGTCAGCAATTCTAACAAGCTAGACACTCCATCAAGCAAATCAGGAACAAAGAGATCATCTGATGGTCATAATTCACCTGGACTTAGTAGCCTTGAAATCGGAGAGCAATCTATAAACAAGCCAACAAAGATGGTCCGTGTGAAGAGCCAAATTTTATCAGCAAAAAAATACCCAGCTGCAAGAACGCGTGCACCAGCAATGTTGGATCTCAAGTCTGCCAAATATCTTACTGATTTCGCTATGTACTCATGCCAAGCTCTCACAAAAGAAATCGGCAATGAGTTGAATCGATATGTTACTTTGGTCGATGCAGCACTCAATCAATTTGAGGTTGTTGTGGATAAACACGACGGAAAGCTATGTTTCACTTATGGTTTAGAAGAACTGAACAAGGCTTATAAATTAGACCAGGGCGGATGGATGTATTTGATCCATGTTCTACCACAAGTATTTGTGATTCGCGTTTACGACCGCCATGATTATGAGATTAACTATTCGATGTTTGATCCTCCTTTGAGTTTAAGACTAGACCATGCAATCTATGGTCCAGATGCATCACCAGGATCTATCCAAATTGAGGTGTCGATCCCTTATCGCCACGGCTGGAACTGCTTTAAATTTAGTGTCACTAAATGGTTGACATCTGCAGATGTTACATCTGATTATTTGACTTTCTCTTATGCCAAAGTATTTGATAGATACGTCCACAAAGATTGCAAAGACATTGGTGTTATCGACAATACAGGGCATTACTGGCTGTTCAAGGTAGAGATTCTTTTTGACAATGACGAAATCAAGTTTGGAGGAGATTGGAAGAAATTTCGTGTCACAAGGAAGCTTAACGAGTGGAAGGGAATAAGACTTGGAGCAAAAGGCGTCGGTCACAATGTTTTGCTCTACTGCACGTTTGATTTTTAA 2322 0.4005 MANKFTPISAISGGKKDLKLIVRVAHIWLIRDKENPDDIIFMNMMLVDDKRGRIHATVRKYLVPSIQKMVEEGGTYKLENVMVGFNEGQYKLLPHKHKLSMMNNSRFVKVNAPNIPLNVFEFMAFKDILLSQEDDKVADVIGHVVERDILRETEKNGRKSIVIDLTLEDLEHSRIHCSLWGEFATDIDKYFDAQDNSKPVVLIIQLGRLRKYMSAMGIANSFYGSKVIINGDLPEVSDYIKRMGNVDVELTQSVSQMSSYSARPVAEELLDCNRMTIEDLIESKAACNGSVLATICEIETGVEWFFRSCTVCASLVSLIDGKLSCKRCKECKSAVPRFKLHLIVMDESGSTTFVLFDRVVTQFIGRNVQDLIAEMNKPDNKDVYPLEFNFFVDKKMMFKVEVSDGNVNRKWRNYGVKKATDDVEIIDEFIKKYSSKFSNEGDQVETAPENTALGSDANNLEILELGDSVSNSNKLDTPSSKSGTKRSSDGHNSPGLSSLEIGEQSINKPTKMVRVKSQILSAKKYPAARTRAPAMLDLKSAKYLTDFAMYSCQALTKEIGNELNRYVTLVDAALNQFEVVVDKHDGKLCFTYGLEELNKAYKLDQGGWMYLIHVLPQVFVIRVYDRHDYEINYSMFDPPLSLRLDHAIYGPDASPGSIQIEVSIPYRHGWNCFKFSVTKWLTSADVTSDYLTFSYAKVFDRYVHKDCKDIGVIDNTGHYWLFKVEILFDNDEIKFGGDWKKFRVTRKLNEWKGIRLGAKGVGHNVLLYCTFDF 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00005 773 PANTHER OS03G0429900 PROTEIN 5 491 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo6g00005 773 MobiDBLite consensus disorder prediction 468 502 - -
Mepo6g00005 773 SUPERFAMILY Nucleic acid-binding proteins 120 243 IPR012340 -
Mepo6g00005 773 SUPERFAMILY Nucleic acid-binding proteins 4 109 IPR012340 -
Mepo6g00005 773 CDD RPA1_DBD_A_like 19 107 - -
Mepo6g00005 773 Gene3D - 2 109 IPR012340 -
Mepo6g00005 773 SUPERFAMILY Nucleic acid-binding proteins 273 420 IPR012340 -
Mepo6g00005 773 Gene3D - 113 249 IPR012340 -
Mepo6g00005 773 Gene3D - 255 433 IPR012340 -
Mepo6g00005 773 CDD RPA1_DBD_C 290 423 IPR047192 -
Mepo6g00005 773 CDD RPA1_DBD_B_like 139 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00005 Mepo-Chr6 126258 131291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00005 1 371 Core DNA Replication Machinery Family AT5G08020 21.762 3.81e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00005 - - mtr:120577762 597.045