Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo60g00021 ATGATTCAGAATACTGATATGAGACTTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATGTTGCATGCATCTTAACCAAGCTCTTATGGAGTCAAAGGCTGAAGAATACTCTGATGAAAAATGTCGCTTAGTTGAGGATACTACTCAGTATCCTGCAGACGAGGGGGATGGATCTTATGTTAGGGGCAGAACTTGTGAAAGATTGAAGCATTCTGACAGTGAAACCAGTAACATGCCTAGTATTTTCTCCAGTCATGATTCTCTATCTGAAAATACCGAGAGTAAACCGATCATTTCAGAAAAGTGTCAGGATTCTAAGTGTTTAGAAGGTCTTGATGATAGCATTTATTGTATCAGTGGAACCAGTAATGCTAATTTAGTGAGTTGTAGCAATCAAATAACTTCAGACAAAATAAATATATCTTCTAGTTCAGTTTCAGTTAGTCTCTGTGCACCACAAGGGTCTGGAATTGCGCAATCTGTTGATATGCCGGGTTCGTCTGAAATTCTCTCATCTAAATATGCAGACATTCCGGAAAAATTGTCAGAGTCCTGTATGGAAAATGTAGATTCATCGATGACCAAAGATAGAGAACCTATTATTGTTTCTGGTGAAAAATCTCTTCCAGATAAGGGTGAACTTGTTAGTGGTACGGCCGAAGTATCACAAAAAATGTATCCAAAGTCAGAAGCTGATGCTGACAACGATGTTAGTGTTGCTGAAGATGGGAATCATAAATGTTCAGCCCCTGATGGACTGCATGAGAAGGTTGGGGAGCAGGATGAATTACTTGGGATATCTGTACCTCAACCAGAAGATGAGAGTGATGAATCAGATTTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATTCTGGTCGTGAGAACCTGCTTGCCATATGTAGTAGGTGCAGTGAGGGTGCAGAGCACACATACTGCATGAGGGAAATGCTTGAAAAAGTGCCTGAAGGGGATTGGTTTTGTGAGGAATGCCAATATGCTGAAGAGACTGCCAACCAAAGATTGGGAAAAAGTGGTCATAAAGTTAGTTCCACTTCTCAAATTTCTGGCAGAAGGTCTTCTGAAATCATGGAATTAGTTGCAGCAGCAAAGAGGCGGGCCCTCGAATCACGCACTGGATCATCGAAGGCATCAAGCCCCAGGAGAATAGTTCCATTGTCACGGGAGTCTTCATTCAAGAGCTTAGACAATGGAAAGGAGAAACCTGGTCAAACTTCAAGGAGAATGGGTACATTGTTGAAGTCTTGTTCATTCAACAACTTCAAGTCCAAATCAAGAGTCAAACTTGATGATGATGTTCCTCAAAAGCAGAAAGGGGGTGGTGAACATGTCTCTAAGAACACGGAGACACCTATCAGGACAATAGGAAAATCAATGTCATTCAAATCCTCAAATTTGGGTCGTGCTACTGAATCAAAAGTTAAAATGCTTTCTCCTAAGTCTGGAATTGCTCAGAATTTGAAAGGATCAAGCCTTGCAAAAGAATCAGGTGTATTTGACAGGAAATCTCTGTCTAGGATTGATCAGCCTGTCGTCTGTTCAACTATGGCTAGTTCTGTCATTTCCATGCACAATCAGAATCTTACACCTCGTGGTGAAACTGTTAAACCTTTAGCAATTAACTGCAACCAGGATTTTAAAGTTAACCATGATGGGAAATCAAGTTCATTATCAAAGTCCGTTAATAATATAAGCAACGAAAGTTCAGAACCTCTAGTTATTTCAGAGAAAATGTCAACCAGTGTGAATGACACTCAATTGGATGGGCTGCCTCGATTACGAGAAACAGAAAATCAGGTTGATAAAACAAAAGATAGTTATACTCATCGTGTGAGGTCAGATACTGATGCTTCAAAATCTCCGTTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGCTGTACGGTTAGTGTTGCACAAGAATTTGGTACTGATGGATCACTTAATGCGGTAAGTAGTCCAAAAGAGTCGCATACAAGTAATAGATTGAAAGCTGCAATTCAGGCAGCTTTGCTTAAAAGGCCTGAAATACACAAGAAGAAAGATCTACATGATCAAACTGATCAGTTTCCTCCATCAGGCACAATCTTGAAACGTAAAGTCAGTTCTCAAGACCAAGCGGAGGTCTCTGCTTCTAACAAACTGAAAAATAGTATTTCTGTTGTAGAAATCAATGCCAGACAGGAAATGCTTGGGAATTCTACATCTGAAACGTCCAAATGTTTGTCTGCTAACGATTTGGAGCAACTTAAAACTGATTTTTGCTCTCAACTGAAAAAGTCAGATTCTGGTATTCCTGCTTCTGAAAAGCCTGTGGTGAGAGACTTGCCCTATCATGCTTCGGCAAATTCAAGTGTTACATCAGAGATGTCAGCCATTCCAGAATACAAATACATATGGCAGGGTGTCTTTGAAGTAAATGGAAGTGGAATGTCTCCTGACCTTTATAATGGGATTCAAGCACATTTATCCTCGTGTGCTTCCCCCAAGGTTCTTGATGTAGTGGACAAATTCTTACCTGAAATTTCCCTGCACGAAGTTTCTCGCTTGAGCACATGGCCTTCACATTTTCATCAATGTGGTGCTAAAGAAGATAACATTGCACTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTGCTGGATCACATGATTAGACATGATTTAGCACTAAAAGGGTTTTTTGATGGCGTCGAACTTCTCATATTTGCTTCCAATCAGCTCCCTCAAAATTCACAGCGTTGGAATATGCTGTTTTTTTTATGGGGCATATTTAGAGGGAGGAGGATTCATCATTCAGATTCTGCAAAAGATATTGCTTTACCTAGTTTGAATGTGGCGGTGCCAAATGAGAAGGATTTTCCGACTGCTGTCATGACCTTGACTGATACTCGCTGTTCACCAGTGCGCATCGATGAAGAATCAATAGCTTGTGGTGATATTTTCAGTGAACTTCCAGCCACTTCTGTTGACCAAGGTCATATTATGCTAAGTAGAGATTTTGATATAAAAGAAACTATTTTTGACCAGACACATTTGGGTTCACAAGTAAACTTCGATAGGCAAGATAGTAGAATCAGCGCCAAATCTTCGTCAAGGATTTCAACAAATGGTATACAACGGTGTCCAGAAATGAATTCCACTTGTTCATCTCTGAAACAGAAAGGTAGTTTGTCAGAGCATGGACTGCACAGAGCGTCAAAACCTCTGGAAGAGGTGGGAACGATTGTAAGAGCTATGACTGTGGAAACAAAAGCTAATTGTGGTATTTCTGTCAAGCAAGAGAACTCTGTGTCTTCAAGGGTTCCTCATGTTGACAATCAAGAGGTACTTACTGCAAACAGCACCAGGAAAGATAAAATTTCAGAGAGAACAAACAATAATGAAAATCATCGAAGGCCTAAAAGGAAAGAGAGAGAAGATGATCTCAATATTAATGTAGAAGCAACATTTCAGGGAGATCTAGCCATAGAAGCGGTCAGCTGTCGGCTACCTAATGTTATAGAAGTTGAGCATATAGACCATTCTGACACAGTTATGGACGCTTCTGCAGCTGGTTGTCAGGAAATGCCTCGGAATAAGATAGATGGGAAGTTGGAAGATACAGACAGTTCTAACAAGCTGCAGTCAGGTTTCAGTGGAATCTATGGATGGTACAGTTCTGTAGCTAGGGATTCTTTGAACGGAAGTTCTGCATCACTTGTAAACGATTTTGGTTCCGCTTCTTCAGTTGAAGACAAAGGATGCAAAGAAGCTTGTGATGAGAAAATCATCCATGAGGACCTTGGAACGATGGAAAAAACCTTCTTCCCTATTGATACACACAATACAAATGACTCACGATTGGTGCTGGATAGCATGTCACTGAAAGGGCCTCATGAGAGCGGTGACCAATTTGAAGTTGGGATTCCAAGTCTCAAGCTTGCATTGGGGGGTGAAATGAAACAGTCACTAGAGGGTACGCTTCCTTTCTTTGCTGGGATAGCTGATAAGAAAAGTAACCAGGCAAAGACTCCAGATTGTTTGGAAGCTGAGCAAGAGGATGGCGACAGTGTTGCCGCATCTCTTTCTCTGTCTCTATCTTTCCCATCTTCAAACAAGGAACCCACAAAACATGCTTCAAAAGATGAGCATTTGCCTGATGAGCATCACATGAGTTCTTCGTTGCACTTTTTTGGGAGATTCACTGACAAATAA 4257 0.4076 MIQNTDMRLESGTCNVCSAPCSCCMHLNQALMESKAEEYSDEKCRLVEDTTQYPADEGDGSYVRGRTCERLKHSDSETSNMPSIFSSHDSLSENTESKPIISEKCQDSKCLEGLDDSIYCISGTSNANLVSCSNQITSDKINISSSSVSVSLCAPQGSGIAQSVDMPGSSEILSSKYADIPEKLSESCMENVDSSMTKDREPIIVSGEKSLPDKGELVSGTAEVSQKMYPKSEADADNDVSVAEDGNHKCSAPDGLHEKVGEQDELLGISVPQPEDESDESDFVEHDVKVCDICGDSGRENLLAICSRCSEGAEHTYCMREMLEKVPEGDWFCEECQYAEETANQRLGKSGHKVSSTSQISGRRSSEIMELVAAAKRRALESRTGSSKASSPRRIVPLSRESSFKSLDNGKEKPGQTSRRMGTLLKSCSFNNFKSKSRVKLDDDVPQKQKGGGEHVSKNTETPIRTIGKSMSFKSSNLGRATESKVKMLSPKSGIAQNLKGSSLAKESGVFDRKSLSRIDQPVVCSTMASSVISMHNQNLTPRGETVKPLAINCNQDFKVNHDGKSSSLSKSVNNISNESSEPLVISEKMSTSVNDTQLDGLPRLRETENQVDKTKDSYTHRVRSDTDASKSPFCRKCKDFGHATECCTVSVAQEFGTDGSLNAVSSPKESHTSNRLKAAIQAALLKRPEIHKKKDLHDQTDQFPPSGTILKRKVSSQDQAEVSASNKLKNSISVVEINARQEMLGNSTSETSKCLSANDLEQLKTDFCSQLKKSDSGIPASEKPVVRDLPYHASANSSVTSEMSAIPEYKYIWQGVFEVNGSGMSPDLYNGIQAHLSSCASPKVLDVVDKFLPEISLHEVSRLSTWPSHFHQCGAKEDNIALYFFAKDIESYERHYKGLLDHMIRHDLALKGFFDGVELLIFASNQLPQNSQRWNMLFFLWGIFRGRRIHHSDSAKDIALPSLNVAVPNEKDFPTAVMTLTDTRCSPVRIDEESIACGDIFSELPATSVDQGHIMLSRDFDIKETIFDQTHLGSQVNFDRQDSRISAKSSSRISTNGIQRCPEMNSTCSSLKQKGSLSEHGLHRASKPLEEVGTIVRAMTVETKANCGISVKQENSVSSRVPHVDNQEVLTANSTRKDKISERTNNNENHRRPKRKEREDDLNINVEATFQGDLAIEAVSCRLPNVIEVEHIDHSDTVMDASAAGCQEMPRNKIDGKLEDTDSSNKLQSGFSGIYGWYSSVARDSLNGSSASLVNDFGSASSVEDKGCKEACDEKIIHEDLGTMEKTFFPIDTHNTNDSRLVLDSMSLKGPHESGDQFEVGIPSLKLALGGEMKQSLEGTLPFFAGIADKKSNQAKTPDCLEAEQEDGDSVAASLSLSLSFPSSNKEPTKHASKDEHLPDEHHMSSSLHFFGRFTDK 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo60g00021 1418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 350 IPR013083 -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1357 1418 - -
Mepo60g00021 1418 SMART PHD_3 290 337 IPR001965 -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 77 93 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 439 455 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1372 1388 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1115 1161 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1048 1072 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 348 364 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 379 424 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 74 93 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1115 1135 - -
Mepo60g00021 1418 ProSiteProfiles Zinc finger PHD-type profile. 288 339 IPR019787 -
Mepo60g00021 1418 SUPERFAMILY FYVE/PHD zinc finger 278 341 IPR011011 -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 344 364 - -
Mepo60g00021 1418 PANTHER - 288 958 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1136 1161 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 1389 1408 - -
Mepo60g00021 1418 MobiDBLite consensus disorder prediction 439 461 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo60g00021 287 347 C2H2 Transcription Factor Family AT3G01460 32.787 1.68e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo60g00021 - - mtr:25479298 2622.81