Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04397 ATGTGTGGTGAGCTTCTTTTGAAAGATGGTTTCAATTTACCTGTTGGATTCACATTTGATCCAACTGATCGTGAGCTTGTAGGTTATTATCTAACAAGGAAGGTCTATTACAAACCTATTCAATTTCATGATATTCTAGAATTTTATGTTTTTCAAATTGAACCATTGAAATATTTGGGCATCATCTACGGCATCAATTTGAAACATGTCAAATTCTAG 219 0.3242 MCGELLLKDGFNLPVGFTFDPTDRELVGYYLTRKVYYKPIQFHDILEFYVFQIEPLKYLGIIYGINLKHVKF 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04397 72 SUPERFAMILY NAC domain 8 61 IPR036093 GO:0003677|GO:0006355
Mepo5g04397 72 Pfam No apical meristem (NAM) protein 14 57 IPR003441 GO:0003677|GO:0006355
Mepo5g04397 72 ProSiteProfiles NAC domain profile. 13 72 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04397 12 55 NAC Transcription Factor Family AT3G10480 52.273 1.79e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo5g04397 NAM 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04397 - - mtr:25498955 53.1434