Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04365 ATGGATGGACCAGCGGGCCCTGGTGGTGGAAATGTGAACGCGTTTCTACGGAACTACAAAATGGGGAAAACTCTTGGTATTGGGTCATTTGGCAAAGTGAAAATTGCTGAGCACGTATTGACGGGTCATAAAGTTGCCATTAAGATTCTCAATCGCCGAAAAATAAAGAACCTGGACATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCACCACATTATACGCCTTTATGAGGTTGTAGAAACCCCAACCGACATTTATGTGGTGATGGAGTATGTGAAGTCTGGAGAACTTTTTGATTACATAGTAGAAAAGGGTAGGCTTCAAGAAGATGAAGCTCGCAGTTTCTTCCAGCAGATTATCTCTGGCGTGGAGTACTGTCACAGGAATATGGTAGTTCATAGAGACCTGAAACCTGAAAATTTACTTTTGGACTCAAAATGGAGTGTCAAGATTGCTGATTTTGGCCTGAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCCAACTATGCAGCTCCGGAGGTTATCTCTGGGAAATTATATGCTGGACCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATATGCACTTCTCTGTGGCACTCTTCCTTTTGATGATGAGAATATTCCCAACCTATTCAAAAAAATAAAGGGTGGGATATATACTCTTCCAAGTCACCTATCTCCTGGTGCCAGAGATTTGATACCCAGGCTGCTTGTGGTGGATCCCATGAAAAGGATGACCATACCAGAGATACGCCAACACCCATGGTTTCTTCTTCATTTGCCTCGATATTTGGCGGTGCCACCGCCAGATACACTTCAACAGGCCAAAAAGATTGATGAGGAGATTCTTCAGGAGGTGGTTAATAGGGGATTTGAAAGGGAGCCATTGGTTGAGTCCCTTAAGAACAGGATACAAAATGAGGGTACTGTAACTTACTATTTGTTATTGGACAATCGTTATCGTGTTTCCACTGGCTACCTTGGAGCTGAGTTTCAAGAGACAATGGACTCTGGTTTGAACCGTATCCACTCTGGTGAAGTTGCTTCTCCAGTCGTGGGACACCGCTTTCCAGGGTATATCGATTATCAAGGAGTAGGAATGAGGCAACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCAACCTCGTGAAATAATGACCGAAGTCCTTAAAGCTCTGCAAGAATTGAGCGTCTGTTGGAAAAAAATTGGACCCTATAACATGAAGTGCAGATGGGCTGTTGTCATCCCTGGTCATCATGGAGGAATGGATAACAATTCTGTGCATAGTAATAATTACCTTGGAAATGACAGCATTATTGAGAATGAAGTTGTTCCTAAGTCAACTGTAGTCAAGTTTGAACTGCAGCTGTACAAAACTCAGGAGAAATATCTGCTTGATCTTCAAAGGCTTGAGGGTCCTCAGTTTCTTTTCTTGGATCTTTGTGCCGCCTTCCTTGCGCAGCTTCGCGTTCTCTAA 1539 0.4334 MDGPAGPGGGNVNAFLRNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNLDMEEKVRREIKILRLFMHHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRLLVVDPMKRMTIPEIRQHPWFLLHLPRYLAVPPPDTLQQAKKIDEEILQEVVNRGFEREPLVESLKNRIQNEGTVTYYLLLDNRYRVSTGYLGAEFQETMDSGLNRIHSGEVASPVVGHRFPGYIDYQGVGMRQQFPAERKWALGLQSRAQPREIMTEVLKALQELSVCWKKIGPYNMKCRWAVVIPGHHGGMDNNSVHSNNYLGNDSIIENEVVPKSTVVKFELQLYKTQEKYLLDLQRLEGPQFLFLDLCAAFLAQLRVL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04365 512 Gene3D Transferase(Phosphotransferase) domain 1 10 350 - -
Mepo5g04365 512 FunFam Non-specific serine/threonine protein kinase 10 349 - -
Mepo5g04365 512 PANTHER SERINE/THREONINE KINASE 18 336 - -
Mepo5g04365 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mepo5g04365 512 CDD STKc_AMPK_alpha 16 271 - -
Mepo5g04365 512 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Mepo5g04365 512 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04365 512 FunFam Non-specific serine/threonine protein kinase 10 100 - -
Mepo5g04365 512 CDD AMPKA_C 389 509 - -
Mepo5g04365 512 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mepo5g04365 512 CDD UBA_SnRK1_plant 293 333 - -
Mepo5g04365 512 Pfam Kinase associated domain 1 469 511 IPR001772 -
Mepo5g04365 512 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 464 511 IPR001772 -
Mepo5g04365 512 SUPERFAMILY Protein kinase-like (PK-like) 16 272 IPR011009 -
Mepo5g04365 512 SUPERFAMILY KA1-like 328 511 IPR028375 -
Mepo5g04365 512 FunFam Non-specific serine/threonine protein kinase 395 510 - -
Mepo5g04365 512 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04365 512 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04365 512 Gene3D Kinase associated domain 1, KA1 395 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04365 Mepo-Chr5 56931429 56938134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04365 19 272 CBL-interacting serine-threonine protein kinases AT4G24400 51.765 5.43e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mepo5g04365 Pkinase 5.5e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04365 K07198 - gmx:547544 919.842