Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04355 ATGGATCCTAACGGTTCTATTGATGATAAGTGTGAAAATAGACTCTACGTTGGCAATCTTGATCTCAGAATTACAGAAGCTGCTCTGCTCAAAATGTTTTCTCCTTATGGAAAGATCGTGTCTGAGGACTTCTTGTGGCACACCCGTGGCCCGAAACGCGGGGAGCCACGCGGTTTTGCTTTTATCCAGTATAGCACAAAAGAGGAAGCAATATTGGCCAAGGAGAAAATGCACGGGAGGTTAGCTTGCAGCCGGCCATTGGTTGTTCGCCTTGCGGGTGAGAGGTACGCCCTGGAAAAGGCAGATAGCTCTACAAAAGCAGTAGGTGAAGGGCACAAGTTGCATCTCACTGTTGGTGGCATGGGACAGACGAGTCGAAGTGCGAAAATAGCTGCAATAAAGAACAAGTTGAAGTCTTTAGAAGAGGATAACTCTAAGATCAAGAAACAGAAGCTGAGTGACAATATATCTTGA 474 0.4599 MDPNGSIDDKCENRLYVGNLDLRITEAALLKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSTKEEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVGEGHKLHLTVGGMGQTSRSAKIAAIKNKLKSLEEDNSKIKKQKLSDNIS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04355 157 CDD RRM_RBM18 14 92 IPR039157 -
Mepo5g04355 157 SMART rrm1_1 14 90 IPR000504 GO:0003723
Mepo5g04355 157 SUPERFAMILY RNA-binding domain, RBD 7 97 IPR035979 GO:0003676
Mepo5g04355 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 86 IPR000504 GO:0003723
Mepo5g04355 157 Gene3D - 10 106 IPR012677 -
Mepo5g04355 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Mepo5g04355 157 Coils Coil 130 150 - -
Mepo5g04355 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 51 145 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04355 15 92 Eukaryotic Initiation Factors Gene Family AT1G71770 39.744 4.29e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04355 K24527 - gmx:100806572 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04355 5 56830617 56833593 Mepo5g04355 5 56830617 56833593 ECH