Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04343 ATGTCATCGCCGGGTTTCAATGCCGGCGGTGGTGCTGGCTCGTCGGAGTTTTTCTCCGGCAGATCACAAAATACCATCAACAATCTTATCACCACCACCAACCACCATAACAACCACCACCTTCTTCCATCTCTTTACCGTACCCAACACCACCAACAACAACCACTTCCTCCAATTTTTCTAGATCCTTCTTCACAGATCCAACAAAATCGCTTCATCGGAAAACGTACTTTAGCTGAATTTCAAACCCAACAACAAAATCATGGTTTCAACAATCTTAATCTTGTCAACAACAACAACAACAACAACGTTAATTTCAACAACAATCATGTTCTGTCTAATCTTTTACTTCGTTCTGTAAAACCAAGAACAACAACAACATCAACAACAAATTTTCAGTTTCATGGTAATAATAATACCCATAATACCCCTTTATCATTCTCACTACCTGAATTACAACAATACCCTTACCATCAAACACAACGTTTAGGTGTTCCTCTTCTTCATCAACCAACGATTAACCCAAATTTTCATCATTACAGAAACTCCAATTTAAGTCAAATAACAAGCTCGGTTCAACCGGTTCAAACCACCGTAGCCATGTCCGGTAAAATAGAAGAAAACAACAACAACAACAACGATCACACTCTTCTACAAGAGTTGGAGAAACAGCTTCTCGAAGATAACGACGAAGAAGGTGAAACGGAAACAGCTTCTGTTATTACAACAAGTGAATGGTCAGAGACTTATCAGAATCTAATTGGGCCCGGGGTTGGGCCTGGGCCTGGTCAGGCTCAAGCACAAGCACAGAAACTGGTATCTTCATCACCAACTTCATCAACAACGTCATCAACTTCTTCATCAGCGGCTTCACCTGCTTCTGTTTGTTCAAAACAAACATTGATTGAAGCTGCGAATGCGATTTCCGAAGGTAAGAATGATGTTGCTTTAGAGATCTTGAACAGGTTGGTTCAGAATTTGAATCTGAATTCGATGAATTCGGATCAACGGTTAGCGAATTTCATGGTGAGAGCGTTGAAATCGAGGATGAATCCGGTTGAAAATCCACCGGTTGTTGCGGAATTGTTTGGTAGAGAACATGCTGAGTCGACTCAGTTGTTGCTGGAAAACTCGGTTTGTTTCAAGGTTGGTTTCATGGCTGCAAATCTTGCAATTCTGGAAGCTGCATTTGAAGAAAACGGTAACAGTTTATGTGTAGTTGATTTTGAAATTGGACAGGGAAAACAGTATGTGAATCTTCTTCACGCGCTCAAAGCGCGTGAGGCGGCGCGTGAGGGATTTAGGTTGAAGATTGTTGCGGTGGCGGAGAACGGCGGTGATGATAGAGTGATAGCGGTGGGTGAGATGTTGAGGCTTCAAGCGGAGAAGTTAAGAATTGGTTTCGAGTTTCGTGTTGTTTCGGTGTCTCAGAGACAAGTCTACGAGTTAACTCGCGAGTTATTGGGATGTGATGTTGAAGAGACGATAATTGTGAATTTCGCGTATAAGCTGAATAGAATTCCAGATGAAAGTGTGTCAACGGAAAATCCACGTGACACGCTCTTGAGGCGCGTGAAAACACTCTCGCCTCGTGTTGTGGTAATTGTGGAGCAAGAAATGAATTGTAATACCGCGCCGTTTTTGGCGCGTGTTGCTGAGTCTTGGGGTTATTATTCCGCTTTATGTGACTCGGTCGAGGATAATTCCGACCGAGTCAAGATTGAGGAAGGAGTGAGTCGAAAATTGTGTAATTTGGTGGCTTGTGAAGGTAGGGATCGTGTTGAAAGGTGTGAGGTATTTGGCAAATGGCGCGCAAGGATGAGTATGGCGGGGTTTAAGATGAAACCAATGAGTCAAAATGTTGCCGAGTCGATTAAATCGCGACTCAATATCGGTAATAACGAGTCGCGAGTTAACTCGGGACTCAGTGTGAAAGAAGAGAATGGTGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACGGTTGCTTCTGTTTGGCGTTAA 2004 0.4306 MSSPGFNAGGGAGSSEFFSGRSQNTINNLITTTNHHNNHHLLPSLYRTQHHQQQPLPPIFLDPSSQIQQNRFIGKRTLAEFQTQQQNHGFNNLNLVNNNNNNNVNFNNNHVLSNLLLRSVKPRTTTTSTTNFQFHGNNNTHNTPLSFSLPELQQYPYHQTQRLGVPLLHQPTINPNFHHYRNSNLSQITSSVQPVQTTVAMSGKIEENNNNNNDHTLLQELEKQLLEDNDEEGETETASVITTSEWSETYQNLIGPGVGPGPGQAQAQAQKLVSSSPTSSTTSSTSSSAASPASVCSKQTLIEAANAISEGKNDVALEILNRLVQNLNLNSMNSDQRLANFMVRALKSRMNPVENPPVVAELFGREHAESTQLLLENSVCFKVGFMAANLAILEAAFEENGNSLCVVDFEIGQGKQYVNLLHALKAREAAREGFRLKIVAVAENGGDDRVIAVGEMLRLQAEKLRIGFEFRVVSVSQRQVYELTRELLGCDVEETIIVNFAYKLNRIPDESVSTENPRDTLLRRVKTLSPRVVVIVEQEMNCNTAPFLARVAESWGYYSALCDSVEDNSDRVKIEEGVSRKLCNLVACEGRDRVERCEVFGKWRARMSMAGFKMKPMSQNVAESIKSRLNIGNNESRVNSGLSVKEENGGICFGWMGRTLTVASVWR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04343 667 Pfam GRAS domain family 298 667 IPR005202 -
Mepo5g04343 667 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 265 655 IPR005202 -
Mepo5g04343 667 MobiDBLite consensus disorder prediction 267 293 - -
Mepo5g04343 667 MobiDBLite consensus disorder prediction 251 293 - -
Mepo5g04343 667 ProSiteProfiles GRAS family profile. 288 667 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04343 Mepo-Chr5 56486387 56488904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04343 46 667 GRAS Transcription Factor Family AT5G52510 45.468 7.35e-145 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo5g04343 GRAS 4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04343 - - gmx:100788551 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04343 5 56486387 56488904 Mepo5g04343 5 56486387 56488904 ECH