Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04330 ATGGAAGAAATCAACAACACAACATTGAACGTATCATCAACCAACAGCTGGTTATCTGATTTGGAAATGGACGAATACGATTTCTTTGCAGAGGAAAGCAACCTGAATTTTCTTGATACAGATGTTGTAAAGTTTCTTTCACAAGACATAGGTAATGTATTCCAAGAACAAAACAAACAACAATGCTTCACTTCGGGGTCCACTCCCACATCTCTTAGCAACTCATCAAGTTATGAAACAAATTTGGACACTTTTGACTTTGATTTTGATAAGCCAAACATGGAGCTGAAAACAATTGATCATTGCAACAAAATCAATGAAACCTTTTCACCAAAACTTTCTTCATCACCATCTAAATCATCTCTTCAGTTTCAAACTCCATCTTTTGACAACACCCCAAATTCACCCACTGCTAATTCCTCACAAAACTTGGAAACAAAAACCTCAAAGACCAAAAGGTCTCGTACTCATCATGGTCAAGATCATATCATGGCTGAGAGAAAGAGAAGAGAGAAACTCACCCAGAACTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGGTGGACAAGTATTCTGTATTAGTTGACACTATCAAATACTTGAAAGAGCTTAAACAACGTTTGAAAGTTTTGGAAGAACAAAATGAAAAAACAAAAATAGAGTCACCGATAGTCTTGACCAAACCAGGACTCTGCAACGATGACAACTCCTCGTCATGTGATGAGAGTATTGATTGTGTTGTTGATTTACCATTTCAAGTGGAAGCAAGAATCTTAGGAAAATATATGTTGATTCGGATCCAATGCCAAGAGCACAAGGGGCTTCTAGTTAAAATTATGGTCGAGATTCAAAGGTTTCAACTATTTGTTGTCAATAATAATGTCTTACCTTTTGGAGATTCTATCCTCGACATTACTATTATTGCTCAGTTGGGTGAAGGCTACAACATGAGCATAGAGGAATTTGTGAAGAACCTACGCATGGCAGCATTCAAGTTTATGTCATCATAA 1017 0.3687 MEEINNTTLNVSSTNSWLSDLEMDEYDFFAEESNLNFLDTDVVKFLSQDIGNVFQEQNKQQCFTSGSTPTSLSNSSSYETNLDTFDFDFDKPNMELKTIDHCNKINETFSPKLSSSPSKSSLQFQTPSFDNTPNSPTANSSQNLETKTSKTKRSRTHHGQDHIMAERKRREKLTQNFIALAALVPNLKKVDKYSVLVDTIKYLKELKQRLKVLEEQNEKTKIESPIVLTKPGLCNDDNSSSCDESIDCVVDLPFQVEARILGKYMLIRIQCQEHKGLLVKIMVEIQRFQLFVVNNNVLPFGDSILDITIIAQLGEGYNMSIEEFVKNLRMAAFKFMSS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04330 338 MobiDBLite consensus disorder prediction 110 165 - -
Mepo5g04330 338 Pfam Helix-loop-helix DNA-binding domain 161 206 IPR011598 GO:0046983
Mepo5g04330 338 Coils Coil 196 223 - -
Mepo5g04330 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Mepo5g04330 338 MobiDBLite consensus disorder prediction 110 147 - -
Mepo5g04330 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 227 IPR036638 GO:0046983
Mepo5g04330 338 Gene3D - 143 223 IPR036638 GO:0046983
Mepo5g04330 338 PANTHER BHLH TRANSCRIPTION FACTOR 20 335 - -
Mepo5g04330 338 SMART finulus 163 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04330 Mepo-Chr5 56278490 56280546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04330 105 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.756 2.21e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo5g04330 HLH 5.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04330 - - mtr:25492647 365.155