Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04322 ATGGCCGTTGCTTTTCGAAATAAGGATATCAAAAAGATGATGCCGATATTGAAGAATAATAATAAGCAGTATGAGGACTTGATCAACAAGTGCAGGGATCCTGAGAGTTACGGCGAGGACTCTAACGAAGAATATGACAGCATTGATGATATTATCGATGCTGATGCATCGATCACATGGGAAACCGTTAACAAGAAGTTCAAATGGCTTGTGGCAGTTAGGAGAAGGAAGAAAACTGGAAAAAGGTCCAGGAATATCTTGTTCAAAGGTTCTTCTAATGTTGCCTTATCGAGGGTTAAACTCATTTACTACAAACCTCAAGAGTTAGGCCTATGTGCTTTTCCTGCTGGGCTGGTTTCTGAAGCACATGACTGTCTGTCTGAACTTTATTCCGGTGGAAGGTTCAAAGAATTGCTCGCACAAGGAGTTGTGCGGAGTCGTTATCAAGAAAAGACTCCAGAACAGTTTAGGCATATTATTTCTCTTTACATGGTTGATCAGTTTTGA 507 0.4063 MAVAFRNKDIKKMMPILKNNNKQYEDLINKCRDPESYGEDSNEEYDSIDDIIDADASITWETVNKKFKWLVAVRRRKKTGKRSRNILFKGSSNVALSRVKLIYYKPQELGLCAFPAGLVSEAHDCLSELYSGGRFKELLAQGVVRSRYQEKTPEQFRHIISLYMVDQF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04322 168 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 108 156 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo5g04322 168 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 108 156 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04322 Mepo-Chr5 56098364 56099539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04322 108 157 Eukaryotic Initiation Factors Gene Family AT3G56150 72.000 1.06e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04322 K03252 - twl:120012355 85.5001