Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04318 ATGCTATTGGAAGTTCCCAATAATGCAGCCAATGTTCATGACGCGAAGCATAAGATCATCAGTATGAATATCCGTTGCTTTCTCGAGATCAGCGAAAAAAAAAAGTCAACGGTCTTCCAGAAAATGTTAAGCATCATGTCATGGTTGTCACAAGGCTTCTTATCAATGGAGACTTCCACAAAGCTTTTGACAATATTGCATCTCGACGTATTGAAATTTGTGAAAAACCGAGACTCCGTGCTAGAGATGCTGAAGGAAAAAAAAATCAAGGAGGAGACACTAAGGACATACTTATTTACCTCCTCTTCATCATATGATTCTTTGAGAGTGGATCAGCTAGCAAATTGTTTCGACCTCTCTTCTACTTGTGTTCATAGTATTGTCAGTATAAGTGTAATGAATGACGTCCTTCATGCTAGCTGGGATCAACCATCTGGGTGCAATCACTACAAGAAAACTCTGAAATTCCGAGGCACAAAACTCCTTGGAAATAATCCATATCTCCACGGAATGTCTATTTTTTCCAAGGAACTCATGTCCTGGAAAAATAGTTGGTTGCAATCCTAG 567 0.3933 MLLEVPNNAANVHDAKHKIISMNIRCFLEISEKKKSTVFQKMLSIMSWLSQGFLSMETSTKLLTILHLDVLKFVKNRDSVLEMLKEKKIKEETLRTYLFTSSSSYDSLRVDQLANCFDLSSTCVHSIVSISVMNDVLHASWDQPSGCNHYKKTLKFRGTKLLGNNPYLHGMSIFSKELMSWKNSWLQS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04318 188 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 151 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo5g04318 188 Pfam PCI domain 70 147 IPR000717 -
Mepo5g04318 188 SUPERFAMILY "Winged helix" DNA-binding domain 89 147 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04318 Mepo-Chr5 56057466 56058032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04318 1 147 Eukaryotic Initiation Factors Gene Family AT3G56150 52.027 3.07e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04318 K03252 - gmx:100805203 140.969