Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04313 ATGCTAGAAGATTTCCTTTTCAGGGATATTCCATATAAGGATGCTAAAAGTATGAAGCAGAAATTGAAGAAGAATAATAAGCAGTATGAGGATTTGATTAGCAAGTGCAATGAGAAGCCTGAGAGTTACGGTAGGGACTCTAACGATGAATATGAGAGCCATGATGAGATTATCGATGTTGATCCGTCGATCACATGGGTCACTGTTAACATGAAGTTCAAAGATCTTGTGGCGGCTAGAGGAAGGAAGAAAAATGGAAGAAATATCCAGGACTATCTTGACGGGATCGGAGATTTCAAAGGTTCTTCTAAGGTGGCCTTGAGGAGGGTTGTACTCATTTACTACAAACCACAAGAGGTTTACAAGGCAATGAGAATATTGCCTAAGCCGGAGAACAATAGGACCCTAGTGGCTGGATTAGTATCACTAATATACAAATACAGAGACGAGCGCACCAAAGTATGTGCAATGCTTTGTAATATATATCACCATTCTCTTCATGATGAGTTCACTAAATCCCGTGATTTCTTGCTTATGAGTCATTTACAAGAAAATGTTCATCACATGGACGTTTCAACACAGATACTTTCTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCAAGCTGGGCTGGTTTCTGAAGCACATGACTGTCTGTCTGAACTTTATTCTGGTGGAAGGGTGAAAGAATTGCTTGCACAAGGAGTAGCACGGAGTCGTTATCATGAAAAGACTCCTGAACAGGTATTAAATCCCATCTTTTTTCAAATTATTGTCAGTAGGAGTGTGATGAATGACGAGAGTCATGCAAGGTGGGGTCAGCCATCTGGGTGCATTGTGTTCCGAAATGTTGAACCCTCTATGGTGCAGGCTTTATCGTTTGAGTTGATGACTGAGAAATCATCCATCCTTGTTAAGAGTAATGAAAGAGCTACTGAGAATATATTGCTAACTTAG 963 0.4039 MLEDFLFRDIPYKDAKSMKQKLKKNNKQYEDLISKCNEKPESYGRDSNDEYESHDEIIDVDPSITWVTVNMKFKDLVAARGRKKNGRNIQDYLDGIGDFKGSSKVALRRVVLIYYKPQEVYKAMRILPKPENNRTLVAGLVSLIYKYRDERTKVCAMLCNIYHHSLHDEFTKSRDFLLMSHLQENVHHMDVSTQILSNRAMSQLGLCAFQAGLVSEAHDCLSELYSGGRVKELLAQGVARSRYHEKTPEQVLNPIFFQIIVSRSVMNDESHARWGQPSGCIVFRNVEPSMVQALSFELMTEKSSILVKSNERATENILLT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04313 320 Coils Coil 12 39 - -
Mepo5g04313 320 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 88 250 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo5g04313 320 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 259 315 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04313 Mepo-Chr5 55977128 55979030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04313 260 316 Eukaryotic Initiation Factors Gene Family AT3G56150 56.140 5.82e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04313 K03252 - egt:105950457 237.654