Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04302 ATGGTCAGCAGAGAGAATGAAGGGAAGAAGCAGAACGGAAACAAGAGAGGGAGTGTGATATATTATCACCATGCTCTTCATGATGAGTTCAGTAAAGCCCGTGATTTGTTGCTTATGAGTCATTTGCAAGAAGATGTTCACGGCATGGACGTTTCAACACAGATACATTTTAAAAGAGCTATGTCACAGTTAGGGCTACATGCTTTTTGTGCTGGGATGGTTTCTGAAGCACATAACTGTCTGTCTGAACTTTATTCCGGTGGAAAGGTGAAAGAATTGCTCGCAAAAGGAGTTGCATGGAGTCGTTATTGGGGTCAAGTGCATATATGTGTGTGTGATATGTGA 345 0.4203 MVSRENEGKKQNGNKRGSVIYYHHALHDEFSKARDLLLMSHLQEDVHGMDVSTQIHFKRAMSQLGLHAFCAGMVSEAHNCLSELYSGGKVKELLAKGVAWSRYWGQVHICVCDM 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04302 114 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 22 103 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo5g04302 114 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 22 102 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04302 Mepo-Chr5 55810583 55811105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04302 23 103 Eukaryotic Initiation Factors Gene Family AT3G56150 67.901 1.78e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04302 K03252 - dcr:108214259 126.331