Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04290 ATGTCAAGTGAAATAGTCAAGAAAGAAGAATCTCTAAATGTGAAAATCACTAGCAAAAGCTATGTGAAACCTGAGGAAAAAATTGGGAAAAAGGAGTATCAATTGGTCACATTTGACCTACCTTACTTAGCTTTTTACTACAACCAAAAATTAATTTTTTACAAGGGAGGCAACTTTGAAGAAAATGTTGAGAAACTCAAAAATGGGCTTAGTGTAGTTTTGAAGGAGTTTCATCAACTAGCTGGTAAATTAGGTAAAGATGAAGAGGGTGTGTTTTTTGTTCAATATGATGATGACTTGCTTGGTGTTGAAGTTGTTGAAGCTGTTGCTGATGAGATTGGTGTTGAAGATCTAACTGTTGCTGAAAGTAGTGCCATTTTGAAGGAATTGATTCCATATAGTGGAGTCTTGAATTTGGAAGGCATGCATAGACCCTTGTTGGCTGTTCAGCTAACAAAGCTCAAAGATGGGCTCGCAATGGGCTTGGCTTTTAACCATGCTGTCCTTGATGGAACATCCACGTGGCACTTCATGACTTCTTGGGCCGAGATATGCAGTGGTGGACCCATCACAACAGCCCAACCATTCTTGGAACGAACCAAGGCCCGTAACACACGTGTTAAGCTCGACCTCTCCCTACCCGAGCCCAAAGGCCCACCACCATCAGCCAACGGTGAGGTCAAGGATGAACCCAATGGTGAGGCAAAGGTAGAACCCGAAGGCCCGCCACCATCAGCCAACGGTGAGGCAAGGCCCGTACTTAGGGAAAAAATCTTCAGATTTTCCGAGTCAGCCATTGACAAAATCAAGTCAACTGTCAACCAAACCCTTCCATCGGACGGTTCAAAGCCATTCTCAACATTTCAAGCTCTCTCCACTCATATATGGCGCCACGTAAGCCTTGCACGTGACCTAAAACCCGAAGACTACACAGTGTTCACAGTCTTCGCAGATTGCAGAAAACGAGTGAACCCACCAATGCCGGAGGCATACTTTGGAAACCTAATTCAAGCTATATTCACCGTCACGGCTGCTGGGCTTTTGGCGGCCCACCCTCCACAATTCGGTGCTTCTTTGATCCAAAAGGTTATTGAAGGCCATGATGCTAAAGCTATTGATGAACGTAACAAAGAGTGGGAGAGTGCACCCAAGATTTTTCAATTCAAAGATGCTGGTGTGAATTGTGTTGCAGTTGGAAGTTCACCTAGGTTTAAGGTTTATGACATTGATTTTGGGTGGGGGAAGCCAGAGATTGTGAGAAGTGGGACCAATAACAAATTTGATGGAATGATTTATTTGTATCCAGGGAAGAGTGGAGGGAGGAGCATTGATGTTGAATTAACATTGGAGCCTGAGGCTATGGGAAGGTTGGAGCAAGATAAGGAATTTCTTATGGAAGTATAA 1404 0.4387 MSSEIVKKEESLNVKITSKSYVKPEEKIGKKEYQLVTFDLPYLAFYYNQKLIFYKGGNFEENVEKLKNGLSVVLKEFHQLAGKLGKDEEGVFFVQYDDDLLGVEVVEAVADEIGVEDLTVAESSAILKELIPYSGVLNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTSTWHFMTSWAEICSGGPITTAQPFLERTKARNTRVKLDLSLPEPKGPPPSANGEVKDEPNGEAKVEPEGPPPSANGEARPVLREKIFRFSESAIDKIKSTVNQTLPSDGSKPFSTFQALSTHIWRHVSLARDLKPEDYTVFTVFADCRKRVNPPMPEAYFGNLIQAIFTVTAAGLLAAHPPQFGASLIQKVIEGHDAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPEIVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKEFLMEV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04290 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 464 - -
Mepo5g04290 467 Pfam Transferase family 13 463 - -
Mepo5g04290 467 Gene3D - 11 211 IPR023213 -
Mepo5g04290 467 Gene3D - 233 460 IPR023213 -
Mepo5g04290 467 FunFam Tryptamine hydroxycinnamoyl transferase 242 461 - -
Mepo5g04290 467 MobiDBLite consensus disorder prediction 208 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04290 Mepo-Chr5 55574882 55578938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04290 12 467 Monolignol Biosynthesis Gene Families AT5G48930 26.180 4.62e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04290 K19747 - gmx:100790669 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04290 5 55574882 55578938 Mepo5g04290 5 55574882 55578938 ECH