Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04238 ATGTACCTCAAATCCCACTTTCTATTCTTAACCATTCTTTTCTTCACCGCTGTCATCACTGCCATCAACCCCGGTTCCACTCTCTATGCCTCCAACACCAACCAATCATGGTCCTCTCCGAGTTCCACTTTCTCTTTACGCTTTGTCCCCGTCGACCCACCAACCTCTCCTCCGTCCTTCCTCGCCGCCATTGTCTACTCTGGTGGAGCTCCTGCTGTCTGGACAGCCGGTAACTCTACTGCTGTCGACTCCGGTGGTTCCTTCCAGTTTCTTACCAATGGCAACCTTCGTCTCATTAACGGTTCTGGTGCCACCGTCTGGAACTCTGGGACTGCTAATATGGGTGCAACATCTGCCACCATTGAAGACAGTGGTAAATTGGTGATTTTGAACAGAATGAAGGAGGTTTGGTCGAGCTTTGATCATCTTACAGACACCCTTTTGCCTTCTCAGAATTTTACTGTAGGTAAGATTTTGAAATCTGGTGATTATAGTTTTAGTCTTGGAAAGAATGGTAATTTGAATTTGATTTGGAATGATAGTATAACTTTTTGGACTCATGGTTTGGATTCTTCTTTGGATGTGAGTTTGAGTAATCCTGATGTGAGTTTGAGTAATCCTGTTTTAGGGTTAACATCCATTGGAGTTTTGCAACTTTCTGATGTGAAATTGAGTACCCCTGTTATTGTTGCTTATAGTAGCGACTATGATAATGTTGGGAGTGGTGTGAGTGATGTTCTTAGGGTCTTGAAATTGGATAAGGATGGAAATTTGAGGATTTATAACACTTCTAGGGGTAGTGGAGATCCAGTTGTGAGATGGGCGGCCGTTCAGGACCAGTGTAAGGTTTATGCTTTTTGCGGGAAGTATGGTATTTGCAGTTATAATGATACGAACCCTATTTGCGGTTGTCCTTCGGAGAATTTCGAGAAGATTGGCGGTAATAGAAAAGGGTGTAGGAGGAAGGTAGATCTTGATAGTTGTCAAGGGAATGAAACTATGTTGACATTGGATCGTACGCAGTTATTGACTTATTACCCTGAGAGTGATTCGTCGTTTCTCATTGGTTTCACGGCGTGTAGAGGAAACTGTCTCTCAGGTTCGCGTGCTTGTTTTGCTTCTACTTCATTGTCGGATGGAACTGGATGTTGTTCTTTGAAGTCAGTGGATTTTTTCAGTGGATATTATAGTCCAACGTTACCTAGTATTTCGTATGTCAAGGTTTGTTCGCCATTGGCTCCAAATCCACCGCCGCCTTTGGGGGAGACGGTGAAGGAAAAGAGTTTGAGTTTACCTGCTTGGGTTATTGTGGTTGTTATTCTGGGTACCCTTTTAGTTGGGGTTGCTATTGAAGGTGGATTATGGATTTGGTGCTGTAGAAAAACTGCAAGGTTTGGTGTATTGTCGGCTCGGTATGCACTTCTAGAATACGCTTCTGGTGCGCCTGTTCAGTTCACATACAAGGAACTTCAGCGCTCGACAAAAGGGTTCAAAGAGAAGCTCGGAGCTGGTGGATTTGGTGCTGTGTATCGAGGAATTCTTGTTAACAAAACTGTTGTTGCAGTGAAACAGCTTGAAGGAATTGAGCAAGGTGAGAAACAATTTAGGATGGAAGTTGCAACTATAAGCAGCACTCATCATCTTAATTTGGTGAGACTTATTGGTTTTTGCTCGGAAGGACGCCGCAGGCTTTTAGTCTATGAGTTCATGAAAAATAGTTCCTTGGATAATTTTTTATTCCCGGAAGAAGAGCAACTGGGAAAACTGTTGAATTGGGAGTATCGGTACAATATAGCGCTCGGCACTGCAAAAGGAATCACATACCTGCACGAGGAGTGTCGCGACTGCATAGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGAGAATTACGTCGCTAAAGTATCTGATTTCGGTCTGGCAAAGCTCATTAATCCGAAGGACCATAGACACAGAACTTTGACAAGCGTACGAGGAACAAGAGGATATTTAGCACCTGAATGGATTGCAAATCTTCCTATAACATCAAAATCCGATGTTTACAGCTACGGCATGGTTTTGTTGGAGATTGTGAGTGGAAAGAGGAACTTTGATGTCTCCGACGAAACCGATAGGAAGAAATTCTCAATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAAAGGAATTTTGGATAAAAGACTCGCCGATATGGAAGTTGATATGGAGCAAGTTACGAGAGCGATTCAGGTCTGCTTTTGGTGCTTCCAAGAGCAACCATCTCAAAGACCCGTGATGAGCAAAGTCGTTCAAATGCTAGAAGGTGTAAAAGAAATTGAGAAACCACCTCCTCCAAAATTAGTCATTGAAGGACCTGTTAGTGAAACCAGCATCTACATTAGTAGCAATGTTAGTGCATTTTCCACAATTGGAGCCTCACCAAATATTCCTTCACCATCATCAATCCAGACCAGCGGTGTTTCATACTTCACCTCAGGAAGAAACCCTGAGAAGGCAACTTCATCCCTTTTGCAATCAAATCAATGA 2535 0.4308 MYLKSHFLFLTILFFTAVITAINPGSTLYASNTNQSWSSPSSTFSLRFVPVDPPTSPPSFLAAIVYSGGAPAVWTAGNSTAVDSGGSFQFLTNGNLRLINGSGATVWNSGTANMGATSATIEDSGKLVILNRMKEVWSSFDHLTDTLLPSQNFTVGKILKSGDYSFSLGKNGNLNLIWNDSITFWTHGLDSSLDVSLSNPDVSLSNPVLGLTSIGVLQLSDVKLSTPVIVAYSSDYDNVGSGVSDVLRVLKLDKDGNLRIYNTSRGSGDPVVRWAAVQDQCKVYAFCGKYGICSYNDTNPICGCPSENFEKIGGNRKGCRRKVDLDSCQGNETMLTLDRTQLLTYYPESDSSFLIGFTACRGNCLSGSRACFASTSLSDGTGCCSLKSVDFFSGYYSPTLPSISYVKVCSPLAPNPPPPLGETVKEKSLSLPAWVIVVVILGTLLVGVAIEGGLWIWCCRKTARFGVLSARYALLEYASGAPVQFTYKELQRSTKGFKEKLGAGGFGAVYRGILVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRRRLLVYEFMKNSSLDNFLFPEEEQLGKLLNWEYRYNIALGTAKGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWIANLPITSKSDVYSYGMVLLEIVSGKRNFDVSDETDRKKFSIWAYEEFEKGNIKGILDKRLADMEVDMEQVTRAIQVCFWCFQEQPSQRPVMSKVVQMLEGVKEIEKPPPPKLVIEGPVSETSIYISSNVSAFSTIGASPNIPSPSSIQTSGVSYFTSGRNPEKATSSLLQSNQ 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04238 844 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04238 844 Gene3D - 144 278 IPR036426 -
Mepo5g04238 844 SMART serkin_6 495 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04238 844 Gene3D Phosphorylase Kinase; domain 1 467 569 - -
Mepo5g04238 844 Gene3D Transferase(Phosphotransferase) domain 1 570 778 - -
Mepo5g04238 844 PIRSF SRK 1 814 IPR024171 GO:0004674
Mepo5g04238 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 188 IPR036426 -
Mepo5g04238 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 143 276 - -
Mepo5g04238 844 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Mepo5g04238 844 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Mepo5g04238 844 Pfam S-locus glycoprotein domain 246 305 IPR000858 GO:0048544
Mepo5g04238 844 Gene3D - 16 141 IPR036426 -
Mepo5g04238 844 CDD STKc_IRAK 501 771 - -
Mepo5g04238 844 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Mepo5g04238 844 Pfam D-mannose binding lectin 73 157 IPR001480 -
Mepo5g04238 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 142 - -
Mepo5g04238 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mepo5g04238 844 SMART blect_4 28 143 IPR001480 -
Mepo5g04238 844 MobiDBLite consensus disorder prediction 808 844 - -
Mepo5g04238 844 ProSiteProfiles Bulb-type lectin domain profile. 144 273 IPR001480 -
Mepo5g04238 844 FunFam S-receptor-like serine/threonine-protein kinase 469 569 - -
Mepo5g04238 844 Pfam Protein kinase domain 498 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g04238 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 779 - -
Mepo5g04238 844 PANTHER OS07G0415500 PROTEIN 8 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04238 Mepo-Chr5 54690629 54693463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04238 468 779 Receptor kinase-like Gene Family AT5G20050 44.615 7.93e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo5g04238 Pkinase 9.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04238 - - cam:101506838 1387.09