Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04236 ATGCCTATTGAAACCACTGATCTTACAAACTTCCTTGACTCCCCTCCATCACCACACATATCTTCATCTAATGCACCAATGATCCTTAATTTTGACCATGTTTTTAAAAATCCTAATCTTCACCACCATGTCCAACACCACCGACACCAAACTACTTTGTTGGTACCACCAACAGCTCAAGGACACACCCATGATTCCACTCGAATCACTACTGATTGGCCCCAACCTGCCACGCATGGTCGTAGCCTAATTGCTAGGGTTCTTCGACCGTTACCTGGATCAGACACCATGCCATTCCCAAATGGATCTAGGCTCATGGTGCCTTGGAGTCAATTAGAGCATGACTTATTTGTGATGGGGATGATTAAGTATGGAAAAGGGAAATGGAGTGAAATTGCTAAGAACTTTGTATGCAACAAGACTCCACAACAAGTTCAAAGCTATGCTAATAGCTTCTTCAGGTACCTACCAGACACATATTTGCATGGTTTAAGGAAAAGGAAAAGGAACAACATGATTGTTAACAATGATCTTGCAAAGGAAACTCTCACTCTTTTTCCAGAAGTTCCAACATTTTATGGAGGAGAAGCTAGCAGTAGCAAGAACACTAACAACTATGAAGCAGGCACTTCCATGCCTCTTCCTGTTGTTTTTGGTGATGGAGAAGTTGATGTGGAACTTCATTTGGGTTTAAATTAG 699 0.4177 MPIETTDLTNFLDSPPSPHISSSNAPMILNFDHVFKNPNLHHHVQHHRHQTTLLVPPTAQGHTHDSTRITTDWPQPATHGRSLIARVLRPLPGSDTMPFPNGSRLMVPWSQLEHDLFVMGMIKYGKGKWSEIAKNFVCNKTPQQVQSYANSFFRYLPDTYLHGLRKRKRNNMIVNNDLAKETLTLFPEVPTFYGGEASSSKNTNNYEAGTSMPLPVVFGDGEVDVELHLGLN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04236 232 Pfam Myb-like DNA-binding domain 108 150 IPR001005 -
Mepo5g04236 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 157 IPR017930 -
Mepo5g04236 232 Gene3D - 107 157 - -
Mepo5g04236 232 ProSiteProfiles Myb-like domain profile. 108 153 IPR001005 -
Mepo5g04236 232 SMART sant 105 155 IPR001005 -
Mepo5g04236 232 SUPERFAMILY Homeodomain-like 108 155 IPR009057 -
Mepo5g04236 232 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 40 160 IPR043363 -
Mepo5g04236 232 CDD SANT 108 153 IPR001005 -
Mepo5g04236 232 ProSiteProfiles SANT domain profile. 104 157 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04236 Mepo-Chr5 54660461 54661803 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g04236 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04236 - - mtr:11445327 233.032