Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04224 ATGAATTCTGCACCACAGTCATCATTAGCCACTGCCGCCAGCAGAAGCGAAGGAGGTATGGCACCGTTTATTCAGAAGACGTATGACATGGTGGATGATCCCACCACAGATGAGATCGTTTCTTGGAGCTCTGATAACAAAAGCTTCATCGTTTGGAACCCTCCTGAATTCTCTCGCATTCTTCTCCCAACCTATTTCAAACACAACAATTTCTCCAGCTTCATCCGTCAGCTCAATACCTATGGATTTCGAAAAGCAGATCTTGATCGTTGGGAGTTTGCCAATGAAAAATTTATAAAAGATCAAAAACATCTTCTGAAGGATATACAACGCAAGAAACCTATCCACAGTCATAGTCATCCTCCGGGTTCTGCTGTAGATCCACAAAGGGCAGCATTGGAGCAAGAAATACAGAAGCTGTTTCGCAAGAAAAATGCACTTCAATCCAAACTCTTAAGCTACAACTATCTTGAGACAGAAAAGCTTCAGCTGGAAGATTTTCAGCGGCGATTGGATGGCATGGAGAAGAGGCAGACAAATTTGCAGAACTTCTTTGAGAAGGCTCTTCAGGATTCTTTTATTGTTGAACTTCTTTCCCGCAAAATCGAATCCATGAATTTGGCAGCTTATAATAAGAAAAGGCGATTGTCTCAGGTTGATCACATGCAGCCTGTTGCCGAAGGTAGCTTGGTTGACAATCCTAGCTATTTCAGACTAGAACTGACACATGGTTCAAATGAAGATGAGGAAAGCCTGCAGAAATATCTGTCTGAAGGAGAACTGACAGGAACGCAGACAAGAACTGACCTAGCAGATACTGGGGCTATCAATCTAGCTGATCCAAAGGAGGCTTCAGGTAATGTCCAAGTCGAAGCAGCTGCTCAACACGGAGTGAATGATGTGTTTTGGGAACAATTCCTTACTGAAAGACCATGCTATTCAGACAATGAAGAGGCAATATCCAACTAA 969 0.4293 MNSAPQSSLATAASRSEGGMAPFIQKTYDMVDDPTTDEIVSWSSDNKSFIVWNPPEFSRILLPTYFKHNNFSSFIRQLNTYGFRKADLDRWEFANEKFIKDQKHLLKDIQRKKPIHSHSHPPGSAVDPQRAALEQEIQKLFRKKNALQSKLLSYNYLETEKLQLEDFQRRLDGMEKRQTNLQNFFEKALQDSFIVELLSRKIESMNLAAYNKKRRLSQVDHMQPVAEGSLVDNPSYFRLELTHGSNEDEESLQKYLSEGELTGTQTRTDLADTGAINLADPKEASGNVQVEAAAQHGVNDVFWEQFLTERPCYSDNEEAISN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04224 322 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g04224 322 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g04224 322 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g04224 322 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g04224 322 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo5g04224 322 Coils Coil 130 150 - -
Mepo5g04224 322 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 223 IPR027725 -
Mepo5g04224 322 FunFam Heat shock transcription factor 1 16 113 - -
Mepo5g04224 322 SUPERFAMILY "Winged helix" DNA-binding domain 20 112 IPR036390 -
Mepo5g04224 322 Coils Coil 157 177 - -
Mepo5g04224 322 Gene3D - 16 113 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04224 Mepo-Chr5 54411279 54413723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04224 284 321 HSF AT4G13980 68.421 3.28e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo5g04224 HSF_DNA-bind 5.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04224 K09419 - gmx:100786408 343.584