Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04223 ATGATGTTTCGTTTGTTCTTGGTTCCATTTATCTTTCTCTTGGTTGGGTTGGGAGTAGAAGAAACCAATGCTCAATATTACCGGAAAGTTGGAAATAAAATATTTCCATTCTCCACAATAGTGGTTGATCAATCAGGAAATGGACATTTCTCTTCCATTCAATCTGCTATTGATTCAATCCCATTTTACAACAAGAATTGGGTTTCCATTAGGGTTAAGGCTGGTATCTATAGGGAAAAAGTTGTGATCCCCCAGAACAAATCTTACATTATATTGAAGGGAGCTGGAAAAAGACGAACTATTGTTGAGTGGTATGATCCCAATGGACCTGAAAGAAGTCCAACCTTCTCAATATTGGCTGACAACATTCATGTCAGATGTATGAGTTTCCGGAGGTGTTCAATATCAGTTATTGGGGGTGGTTTTATAACAGCACAAGGTAGAATGAGTCCAAATGATACAAATGGATTTGTATTTAAAGATTGTCATATCTTTGGAAATGCAAATACTTACTTAGGGAGACCATGGAGACCTTATGCAAGAGTGCTTTTTTACAAGACCAACATGACCAAAATTGTAGAACCTAGTGGTTGGGATTCATGGAGTCCTGATGGTCGTGAGGATCTAAGTACATATGCTGAGTATGGCAATTTTGGACCAGGTGCTGATACATCCAAGAGAGTAAGTTGGGCCAAGAAATTGGATTTACAAACTGTGGAAAATATGGCCACAGTGTCGGTGTCTATGCCGTGTTCAATTTCCGTGTCTGTATCTGTGTTTCATAGGTGGTAA 792 0.3889 MMFRLFLVPFIFLLVGLGVEETNAQYYRKVGNKIFPFSTIVVDQSGNGHFSSIQSAIDSIPFYNKNWVSIRVKAGIYREKVVIPQNKSYIILKGAGKRRTIVEWYDPNGPERSPTFSILADNIHVRCMSFRRCSISVIGGGFITAQGRMSPNDTNGFVFKDCHIFGNANTYLGRPWRPYARVLFYKTNMTKIVEPSGWDSWSPDGREDLSTYAEYGNFGPGADTSKRVSWAKKLDLQTVENMATVSVSMPCSISVSVSVFHRW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04223 263 ProSitePatterns Pectinesterase signature 1. 64 83 IPR018040 -
Mepo5g04223 263 Gene3D - 37 129 IPR012334 -
Mepo5g04223 263 Pfam Pectinesterase 40 130 IPR000070 GO:0030599|GO:0042545
Mepo5g04223 263 Pfam Pectinesterase 142 234 IPR000070 GO:0030599|GO:0042545
Mepo5g04223 263 SUPERFAMILY Pectin lyase-like 38 237 IPR011050 -
Mepo5g04223 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 131 - -
Mepo5g04223 263 Gene3D - 130 252 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04223 Mepo-Chr5 54364752 54371103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04223 38 246 Carbohydrate Esterase AT1G05310 26.621 4.60e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04223 - - gmx:100818719 263.848