Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04222 ATGTTTCGTTTTTTCTTATTTGCTTTTATCTTTATGTTTGTGGTGTTGAAACAAGATGGTGCTAATGCTCAAATTTACAAAAGAGTGGGAAATAAGCTCTTACCTTATTCAACAATCATTGTAGATCCATTGGGAAATGGGAACTTCACAACAATTAAATCTGCTATTGAATCAATTCCTTTGAACAATAAGCATTGGGTTGCCATTAGGGTGAAGGCAGGTACCTACAGGGAAAAGATAGAGATTCCACGTGATAAACCTTACATCATACTAAAAGGAGCAGGGAAGAGGAAAACCACTGTTGAATGGAATGATCATGGACCAATCTCAGAAAGTGCTACATTCTCCTCAATGGCTGATAATGTTGTCGTCAAATCCATCAGTTTCAGGAATACATACAAGAATCCGATAAAGAACCATACCCACATAGCTGCAGTAGCTGCAATGGTAAGTGGAGATAAGACTTATTTTTTTAGGGTTGGTTTCTTTGGTTATCAAGACACTTTGTGGGACAACAATGGAAGACATTACTATAAGCTTTGTACCATACAAGGTGCTATAGATTTTATCTTTGGTGCAGGCCAGTCTTTGTTCGAGAGGTGTTCCATATCTGTTATTGGTGGTGGTTATATAACAGCACAAGGTAGAACGAATGCAAAGGATGAAAGTGGGTTTGTTTTCAAAGATTGTCATGTCTTTGGTAATGCAAGGGCTTATTTGGGAAGGCCTTGGAGACGCTATGCTAGAGTCTTATTTTACAAAACAAATATGACCAACATTGTAGCACCTAGAGGCTGGAATCCATGGTCTTTTGATGGTGAAGAGGAACAAATAACATTCGCAGAATATGGCAATTTTGGACCTGGTGCTGATACATCCAAGCGAGTGAAATGGACTAAGAAATTGGATTTAGCAACGGTTGAAAATATGGCAAGTCTGAACTTTATCAACACACCAGAAGAATGGATTAATTATCAACCATTCTAA 987 0.3799 MFRFFLFAFIFMFVVLKQDGANAQIYKRVGNKLLPYSTIIVDPLGNGNFTTIKSAIESIPLNNKHWVAIRVKAGTYREKIEIPRDKPYIILKGAGKRKTTVEWNDHGPISESATFSSMADNVVVKSISFRNTYKNPIKNHTHIAAVAAMVSGDKTYFFRVGFFGYQDTLWDNNGRHYYKLCTIQGAIDFIFGAGQSLFERCSISVIGGGYITAQGRTNAKDESGFVFKDCHVFGNARAYLGRPWRRYARVLFYKTNMTNIVAPRGWNPWSFDGEEEQITFAEYGNFGPGADTSKRVKWTKKLDLATVENMASLNFINTPEEWINYQPF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04222 328 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
Mepo5g04222 328 Pfam Pectinesterase 39 316 IPR000070 GO:0030599|GO:0042545
Mepo5g04222 328 SUPERFAMILY Pectin lyase-like 36 325 IPR011050 -
Mepo5g04222 328 Gene3D - 36 327 IPR012334 -
Mepo5g04222 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 323 - -
Mepo5g04222 328 ProSitePatterns Pectinesterase signature 1. 63 82 IPR018040 -
Mepo5g04222 328 FunFam Pectinesterase 35 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04222 Mepo-Chr5 54343568 54348485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04222 2 275 Carbohydrate Esterase AT2G19150 42.199 2.08e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04222 - - mtr:11439145 644.81