Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04179 ATGTTGGGATCAAGTTCTTCTGCTGCTGCTATTTCACCTCCTCGTCAAACTCAGAAGTATGATGTGTTCCTCAGCTTTAGAGGGGAGGACACACGTGACAACTTCATGAGTCATCTATATGCTGAACTAGACAGGAAAAAGATTGAAACCTTCATAGATTACAAACTCGGCAGAGGCGATGGGATTTCGCCTGCACTCTACAAAGCAATTGAAGAATCAATGATTTATGTCGTCATTTTGTCTGAGAACTATGCTTCTTCCACATGGTGTTTGGATGAACTCGCACATATCCTTCAATGCAAACAAAGATATAGCGAAAGGCATGTGATACCTGTTTTCTATAAGGTGGATCCATCAAATGTGAGGCATCAGAAACATAGTTTTGCAGAAGCTTTTGTTGAGCATCATCGCCGATTTAAGGATGATCAGGTGAATGCATGGAAAGCTGCTCTAAACCAAGTAGCTGGACTCTCTGGCTGGGATTCACAAAAAACCAGATCAGAACACACACTTGTTGAAGACATTGTGAGAGATATTTCAAGAAAATTGAATTTGAATCACTCTTTCTTAAGTGATTATCAAGGATTGATTGGAATTGAGAAGCATATTGAGAAAATCCAATCCATGCTACACCTTGAGTCAGAGGACATTCTAGTTGTCGGAATTTGGGGTATGGGAGGAATAGGAAAAACAACAATTGCGAGGGCAGTATATCACAAACTGGCATCTCAATTCAGTTCCAGCAGTATTGTTTTAAATGTTCAACAGGAAATAGAAAGAGTTGGGTTACACCATATACGAAGCAAATATATATCAGAGCTTCTAGGGGAAGACATATCCTACAGATTAAACTATTCATATGATCGAAGGCTCAAAAGGACCAAGGCTCTCCTTATTCTTGATGATGTGAGCTATTCAAATCAAATCAAAGATTTAATTGGTGAGCATAGTAACTTCGGGAATGGTAGTAGAATCATTGTGACTAGTAGAGACTTGCAGGTACTGAACAATGTAGATGCCGATGAAATATATGAGGTTAAGGAGATGAATTTTCAAGATTCTCTACGTCTCTTCAGTATAAATGCCTTTAAACAAAACTATCCCTTAGAAACTTATGTTGGCTTATCACAAAGGGTATTAAATTATGCTAAAGGGGTTCCATTAGCTCTTAAAGTTTTAGGTTCTTTTCTTTACAGCAGAAGAACAGAGGAAGCTTGGAAAAGTGAATTGCAAAAGCTGGAAAAACTACCCCAGAATGACATTTTCAAAGTGTTGAAATTAAGTTATGATGGTCTTGACGAAGAAGAGATGGATATATTTCTTGACATAGCTTGTTTCTATAAAGGACATTTGGAGTATATTGTTGTACAAACACTGGATATCTGTGGTTTCTCTGTTCACATTGGAATGGAGGTTCTCAAAGATAGGGGCCTTATATCTATTTCGGAAGGTAGAATAGCTATGCATGATTTAATACAGGAAATGGGACATGAAATTGTCCGTCAACAATGTGTCGATGATCCTGGAAAACGCAGTCGATTATGGAAGCATGAGGAAATTTATAAAGTTTTAAGAAACAACAAGGGTACGGATGCAATCCGGTGTATGCTCCTGGACATATGCAAGATAGAAAAGGTTCAACTACATGCTGAAACATTCAAAAAGATGGATAATCTTAGAATGATGCTGTTTTATAAGCCCTATGGCTTTTCGAAAAAGTCAAATGTGATCCTTCCTGCATTTCTTGAAAGTCTTCCGGATGATTTAAAGTTTCTCCGTTGGGATGGATTCCCTCAAAAATCAATGCCACTGGACTTTTGCCCCATAAATCTTGTTAAACTTGATATGCCCCAAAGCCATCTTGAGCGACTATGGGGAGGAGATCAGAATTTACCAAATTTGGAAAGGCTTGACCTACGTGGTTCTCGGAACCTGATTCAAATACCAGACCTCGCTCAATGCCCAAATATTAAAGAAGTAATTCTTAGTCATTGCACAAAGTTGGGTCAAGTTTACTCTTCTAGTTTCCTGTACAAGCTCAAATGTTTGTGGTTAAATGGCTGTGCTGGGCTTAGGAGTTTACACATTCCTAGCAATATTCTCCAGAGAACTTCTGGATTAATAGTCCTCCATGGTTGTAGAAATCTTGAAATGTTTGCAGTCGGTAATGCAATAATGAGGGTTCAATGTGCTGCACCATATGATGATATCAGCATGTTCAGAAACATTTTGTCCGTGAAAGACACAAAAAAAGCAGATTGTTCCTCATTTGAGAAATTCTCAAAAACTTTTGAACCCCTAGATTGTGTTGAATTAAACAAAGAACCAGAGGATAATATACAATTGCTAAACTTAGAAGTGTTGAGAGAAAGTTCGCCCTCATTATTTCCATGTCTAAATGAACTTTGTTGGTTAGATTTTTCCAACTGTGAATCCCTCTTGAGCCTTCCAACTGAACTTTTTAAGTTGAAATTTCTAAGAAGGCTTTACCTCAATGGTTGCTTTAATTTGGAAAATTTCCCCGAAATCGAGGAGACTATGGAAAGTTTGACGGTGCTCATCTTAAACAAAACAGCAATCAAGGAACTACCTTCATCCTTGCACCATTTGGTCAGCCTTGAAGAATTGAGCTTGTACAATTGCCAGAAGCTCAAGTCTATTCCATCATCTGTTGGAAGTCTAAGCAAACTCAGCAACTTAAACATTACCTGTTGTGAATCACTTGAAACTTTTCCAAGCAGTATTTTCAAATTGAAGCTGGCAAAACTTGATTTACATGGTTGCTTAATGCTGAAGACTTTCCCAGAGATTTTGGAGCCTGCAGAAACATTTTTTCACATAAACTTAACAAAAACAGCAATTAAGGAACTCCCTTCATCTTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAACAATCTATATGTGCTTGATTGTTCTGGCTGTTGCAATTTAACAGAAATCCCAAATAACATCGGTAGTTTGTCATCATTGAGGGAACTTTCACTGCAAGAAAGTAGTATTGTGAACCTTCCAGAGAGCATAGCTCATCTCTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAACATATCCCACAACTTCCAGCATCTCTATGCCAGCTGTTGGCGTATGATTGCCTGTCCGTTGGAAGAATGATGCCAAATTCAAGGCTGGAACTCCCAACAATTTCAAACAAGGATGCCTTTGAACTTCTCTTCACCAATAGTCAAGGACTGGATGAAACTGCTTGTATTCATCTTGGGGCTGAAGCATGGCTTAGGATCACGGAGGAAGCGTATAGGTGTGTGTTTTTCTGTTTTCCTGGGAGTGCAGTTCCTCTTTGGTTCCCTTATCGTCGTACAGGATGTTTGGTAACCATGAGAAAAGATTCTCAAGATTGGCCTAGTAATAAAAGGCTTGTTGGTTTTGCTCTATGTGTCGTTTTGGAATGTGTCAATATGGATGATAAAATAGAACGTAATAGTAGCATTACATACAGATTAACATTTGAATCTGATGGTCGCACACACGTTCTTCCTAACTATGAAAAGATAAAATGCTGGCACTATTGGAAGGGTCGAGATAGGTTAGTTGTCCAAGATCACACATTCATATGGAAATATAACTTAGACTTTGCTGGCACTTGCAACAGGCTCTTTGATGCCGACAACTTCACTTTTAAGGTCAGCAAACATGATTATCGCTCATATTCTAAATCATGGGTCACAGTGAAAGAGTGTGGAATATGTCCTCTTTATACTAAAAAAATTGATGATAATGGTGGTACTAGTTTGAGACTTCTAAATAATGACATTGAAGAACCAAAGCAGATAAGGCCTGGTTGTTGTAGTTGTTGTTGTGAAGAACGTAAACGGTGA 3942 0.3833 MLGSSSSAAAISPPRQTQKYDVFLSFRGEDTRDNFMSHLYAELDRKKIETFIDYKLGRGDGISPALYKAIEESMIYVVILSENYASSTWCLDELAHILQCKQRYSERHVIPVFYKVDPSNVRHQKHSFAEAFVEHHRRFKDDQVNAWKAALNQVAGLSGWDSQKTRSEHTLVEDIVRDISRKLNLNHSFLSDYQGLIGIEKHIEKIQSMLHLESEDILVVGIWGMGGIGKTTIARAVYHKLASQFSSSSIVLNVQQEIERVGLHHIRSKYISELLGEDISYRLNYSYDRRLKRTKALLILDDVSYSNQIKDLIGEHSNFGNGSRIIVTSRDLQVLNNVDADEIYEVKEMNFQDSLRLFSINAFKQNYPLETYVGLSQRVLNYAKGVPLALKVLGSFLYSRRTEEAWKSELQKLEKLPQNDIFKVLKLSYDGLDEEEMDIFLDIACFYKGHLEYIVVQTLDICGFSVHIGMEVLKDRGLISISEGRIAMHDLIQEMGHEIVRQQCVDDPGKRSRLWKHEEIYKVLRNNKGTDAIRCMLLDICKIEKVQLHAETFKKMDNLRMMLFYKPYGFSKKSNVILPAFLESLPDDLKFLRWDGFPQKSMPLDFCPINLVKLDMPQSHLERLWGGDQNLPNLERLDLRGSRNLIQIPDLAQCPNIKEVILSHCTKLGQVYSSSFLYKLKCLWLNGCAGLRSLHIPSNILQRTSGLIVLHGCRNLEMFAVGNAIMRVQCAAPYDDISMFRNILSVKDTKKADCSSFEKFSKTFEPLDCVELNKEPEDNIQLLNLEVLRESSPSLFPCLNELCWLDFSNCESLLSLPTELFKLKFLRRLYLNGCFNLENFPEIEETMESLTVLILNKTAIKELPSSLHHLVSLEELSLYNCQKLKSIPSSVGSLSKLSNLNITCCESLETFPSSIFKLKLAKLDLHGCLMLKTFPEILEPAETFFHINLTKTAIKELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNNLYVLDCSGCCNLTEIPNNIGSLSSLRELSLQESSIVNLPESIAHLSSLKSLDLSDCKRLEHIPQLPASLCQLLAYDCLSVGRMMPNSRLELPTISNKDAFELLFTNSQGLDETACIHLGAEAWLRITEEAYRCVFFCFPGSAVPLWFPYRRTGCLVTMRKDSQDWPSNKRLVGFALCVVLECVNMDDKIERNSSITYRLTFESDGRTHVLPNYEKIKCWHYWKGRDRLVVQDHTFIWKYNLDFAGTCNRLFDADNFTFKVSKHDYRSYSKSWVTVKECGICPLYTKKIDDNGGTSLRLLNNDIEEPKQIRPGCCSCCCEERKR 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04179 1313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 443 IPR027417 -
Mepo5g04179 1313 Gene3D - 349 433 IPR042197 -
Mepo5g04179 1313 PRINTS Disease resistance protein signature 219 234 - -
Mepo5g04179 1313 PRINTS Disease resistance protein signature 290 304 - -
Mepo5g04179 1313 PRINTS Disease resistance protein signature 383 397 - -
Mepo5g04179 1313 PRINTS Disease resistance protein signature 1033 1049 - -
Mepo5g04179 1313 SUPERFAMILY "Winged helix" DNA-binding domain 420 524 IPR036390 -
Mepo5g04179 1313 Pfam NB-ARC domain 200 429 IPR002182 GO:0043531
Mepo5g04179 1313 SMART LRR_typ_2 870 894 IPR003591 -
Mepo5g04179 1313 SMART LRR_typ_2 847 869 IPR003591 -
Mepo5g04179 1313 SMART LRR_typ_2 1012 1034 IPR003591 -
Mepo5g04179 1313 SMART LRR_typ_2 1035 1062 IPR003591 -
Mepo5g04179 1313 Gene3D - 14 183 IPR035897 -
Mepo5g04179 1313 SUPERFAMILY L domain-like 588 866 - -
Mepo5g04179 1313 Pfam TIR domain 19 196 IPR000157 GO:0007165
Mepo5g04179 1313 ProSiteProfiles TIR domain profile. 18 183 IPR000157 GO:0007165
Mepo5g04179 1313 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 763 IPR044974 GO:0006952
Mepo5g04179 1313 Pfam C-JID domain 1128 1278 IPR045344 -
Mepo5g04179 1313 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 185 - -
Mepo5g04179 1313 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Mepo5g04179 1313 Gene3D Ribonuclease Inhibitor 788 942 IPR032675 -
Mepo5g04179 1313 Gene3D Ribonuclease Inhibitor 943 1072 IPR032675 -
Mepo5g04179 1313 Gene3D Ribonuclease Inhibitor 527 727 IPR032675 -
Mepo5g04179 1313 Gene3D - 184 346 IPR027417 -
Mepo5g04179 1313 SMART till_3 19 157 IPR000157 GO:0007165
Mepo5g04179 1313 SUPERFAMILY L domain-like 785 1062 - -
Mepo5g04179 1313 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04179 Mepo-Chr5 53610153 53616386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04179 762 984 WRKY Transcription Factor Family AT4G12020 29.555 4.59e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04179 - - ccaj:109803335 1377.84