Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04144 ATGGCAACACGGGTGGCAGCAAGATTTGCATCTAGAAGGCTGTTTAGCAGCGGCTCTAGGAAAGTTGTTGGTGAGGAGGAAAAAGCTGTGGAAAATGCTTACTTCAAGATGAAGTATATACTTCCCAAAGGTATAGAAATTGAAAAGGTGGTTGTTGTTAATAAGAAGAGCTTGTGTATGAAGCCTGATTTGAAGATCACCTTGGTATTTGACGTTGTAGAAGATCACTCCAAACAGTCTGCTGATTTGGCTCTTTTACGATATTTTAATTCCAGGCTGATTAATTTCCTTGATTTGCATCCTGAGAGGATTGATATTCCAATGAAAATTGAACTGTCACTGAGTCCATCTTTTAAAAGTCATTTTTCTCAGAAGAATGTTACTAACGAGACTGAGCAAGTTCAGAGCTTTTCATCATCCCATGAATCTGACTGGCTGGATAACCAAGAAAGTGAAAGCACATGGCAGAAAGAATGTAAGCCATGTGTATTCAACCAAATTTTGTTGACACACACTCCTGCACAGTCAGCACCTGAGAGATTGTTGCTCGGTTCTGATGTTAAGCTTCAGAAAATGACTGCCCAAAAGTCTGGGTCATGTTTTAAGCATGCAAAGAGAGTGCTAGACTTTACACTCACAGAAGGCAGTGATGATTTGGATAATAGATTATACATGTCTAAACCTAGCAGAGGATGTTTTGAGGAGTTCAAATCTTTTGATTCTGTTTAG 729 0.3923 MATRVAARFASRRLFSSGSRKVVGEEEKAVENAYFKMKYILPKGIEIEKVVVVNKKSLCMKPDLKITLVFDVVEDHSKQSADLALLRYFNSRLINFLDLHPERIDIPMKIELSLSPSFKSHFSQKNVTNETEQVQSFSSSHESDWLDNQESESTWQKECKPCVFNQILLTHTPAQSAPERLLLGSDVKLQKMTAQKSGSCFKHAKRVLDFTLTEGSDDLDNRLYMSKPSRGCFEEFKSFDSV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04144 242 SUPERFAMILY "Winged helix" DNA-binding domain 37 127 IPR036390 -
Mepo5g04144 242 PANTHER DNA REPLICATION FACTOR CDT1 37 202 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04144 Mepo-Chr5 52877762 52880646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04144 36 102 Core DNA Replication Machinery Family AT2G31270 44.286 7.33e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04144 K10727 - gmx:100794715 153.295