Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04139 ATGGCTTCCCACACAGTCACAGATCGATTCAAGTACGATGTTTTCCTCAGCTTTCGTGGTGAGGATACTCGCTACAGTTTCACCGGCTATCTCAAGAAAGCTCTTGATGACAAAGGAGGAATAAGAACTTTCATTGATGAAAAGAATCTTCAAAAAGGTGAAGAAATCACACCATCACTTCTTAAAGCAATTGAAGAGTCCATGATGGCCATTGTTGTCCTCTCTGAGAATTATGCTTCTTCCTCCTTTTGCTTACAAGAACTTTCAAAGATCCTTGATACGATGAAAGATAAGGCGGGTCGTTACGTTTTACCAATATTTTATAAGGTGGATCCTTCTGATGTACGAAAGTTGAAAAAGAGTTTTGGTGAAGCAATGGATAAACATAAGGCCAACTCAAATCTGGATAAATGGAAGGGGTCTCTTCACCAAGTTGCTGACTTGTCCGGCTTTCATTACAAAGGGGATATGCCTGAGCATATATTTATTGGGGAGATTGTTGAACAAATCTTGGGAAATATAGAACCTGTTGCCTTACCTATTGGTGATTACCTAGTTGGACTCGAGTACCAAAAGCAACATGTGACTTCCCTTTTGAATATTGGGTCGGATGATACAGTCCATATGGTAGGGATCTATGGGATTGGTGGAATAGGGAAAACAACTCTTGCTCTATCTGTTTGTAATTTAATTGCCTGTCAATTTGATGCTTCATGTTTTCTGGAAAATGTTAGAGAAAATCATGAAAAACATGGGTTACCATATCTCCAAAAGATTATTCTTTCCAAATTAGTTGGGGAAAAAAACGAGTTAACAGGTGTTCTACAAGGAATTTCATTATTGGAGCAGAGGCTCCAGCAAAAGAAGTTACTTTTGATTCTAGACGATGTTAACGATCTAGAGCAATTAAAAGCTTTGGCTGGAAAACACAAATGGTTTGGTCCCTCAAGTCGAATCATCATCACAACTCGGGACAAAAAGTTGTTAACAGGTCATGGTGTTAAATGTACATATGAGGTGAGAGGGTTGAATGACAAAGATGCTTTTAGGTTGGTTAGATGGAAAGCTTTTAAAGATGAATTTAGTCCAAGCTATAACGATGTTTCATTAGCACAAACACATGTTTTAAAACGTGTTGTAGCATATGCTTCTGGTCATCCACTCGCTTTGGAAGTCATGGGTTCTCACTTTTCTAATAAGACAATAGAACAATGTAAAGATGCACTAGATCGTTATGAAAAAGTTCCTCATAAAAAGATCCAAACTACACTACAACTGAGCTTTGATGCTTTGGAGGATGACGAGAAGTTTGTTTTTCTTGATATTTCTTGTTGCCTCAAAGGATGGAATTTGACAAAAGTCGAAGAAATACTTCATGCTCATTACGGTGATATTATGAAAGATCACATTAATGTGTTGGTGGAAAAATCTCTCATAAAAATAAGTGATTCCGGTGATGTTACATTACATGATTTGATAGAGGATATGGGGAAAGAAATTGTTAAACAAGAATCACCTGAAGATCCTGGAAAACGCACTAGGTTATGGGACTCTAAAGACATAATGAAAGTTTTTAAAGAAAATACGGGAACAAGTAACATTAAAGTCATACATTTCCAATTTGACCCCTGTAGAGAAAAACGACATGAAGAATGGGAATCTTTCGTAAAAAAATGGGGGGGGCAAGACCTGAATGAAAAAATGATCAATTGGATTGATAAAAAACGATCGGAAGTCTGGGATGGAAAAGCTTTCAAAAAGATGAAAAATCTCAAAACACTAATTCTTAGTAGTTCTGTTTGTTTTTCTGAAGCTTTTAAACATATTCCAAATAGTCTAAGAGTTCTGGAATATTGCAATCGCAATCCCAATTCCTGTAACTCTTTTTACGTTCTGAATGCGTCAGTTGACCATACATCAAATCCATTTGAGTGGAAGGGATTTCTCACAAAGAAGTTCGATAATCTGAGAGTTTTAAACTATGATGATTACCATACACGGCTAACAAGAATTCCTGATATATCTAATCTCCCAAATTTAGAAGAATTTTCAATTCAAAATTGCAAACAACTATTCACAATCGATGAATCGGTTGGTTTTTTGGGTAAACTTAAAATCTTGAGATTTATATGTTGCCCTAACATCCACAGTGTTCCACCACTCATTTCAGCTTCACTGGTAGAGCTCAATCTTTCACACTGTGATAGTCTAGAAAGTTTTCCTCTCGTGGTGAGTGGATTTCATGGAGAACTTAAAATCTTGAGGGTTATAGGTTGCGGCAAAATCAAACTTATTCCATCTCTCGTGTTACCTTCTCTAGAAGAACTCGATCTTTCAGATTGTACTAGTCTTGAGAGTTTTTCACATATGGTAGATGGGTTTGGTGATAAGCTTAAAACAATGAGTTTCAGAGGTTGCATCGAATTAAGGAGTATTCCACCTCTCAAGTTAGATTCACTTGAAAAACTTGACCTATCGGGTTGTCAAAATCTCGTGAGTATTTCACCTCTCAAGTTGGATTCACTAAAAATACTTGACCTTTCAAATTGTTATAAGCTCGAGAGTTTTCCAATTGTGGTGGATGGGTTGTTGGATAAACTTAAATTCTTAAATATTGAAAATTGCATCATGCTTAGGAATATCCCACGGCTTAGGTTGCCTTCGTTGGAACATTTCAATCTTTCACATTGTTATAGTCTTGAAAGTTTTCCAGAAATATTGGGAGATATGAGAAATATACCAGGACTTCTCTTGGATGAAACTTCCATAAAAGAATTGCCGTTTCCATTTCAAAATCTTACTCGGCCTCAAACATTTGTTCCATGTAATTGTGGATATTCTTGCATACCAAATAGAGCTTCTTTGATGTCAAAAATGGCTGAACTTACCATCCAGGCTGAAGAAAAAGTGAGCCCAATACAATCTTCACATGTGAAGTATATTTGTGTCATGTACTGCAAACTTTCAGATGAATATCTGTCAAAAACTCTCTTGTTGTTTGCTAATGTGAAAGAATTACACCTAACTAACAATGAATTCACAATTATTCCTAAATCTATTGAAAACTGTCATTTTTTATGGAAACTTCTCTTGGATGATTGTACGGAACTTAAGGAAATTAAAGGGATTCCTCCATGCTTAAGAGAGTTATCTGCACTAAACTGCATATTGACTTCGGCTTGCAAAAGCAAATTACTAAATCAGGAATTACATGAGGCTCGAAATACTTGGTTTCGTTTGCCACGGGTGCCAAAGATCCCAGAGTGGTTCGACCACAAATGCGAGGCAGGATTGTCAATATCTTTCCTGTTTCGTAATAAGTTTCCTGCCATAGCTCTCTGTGTTGTTTCTCCAGTTACATTTGATGGTTCTCAGCCTCATGGTGTAAGAGTGATCATCAACGGCAATATATTTTCCTATCCAGATAGTTCGAAGATGGGTACAAAATCAAAGCCGAATATGTATCATTTGCATCTTTTTCATATGCAAATGGAAAACTTCAATGATAATATAGACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTTACTTTGGATTCCCATTCATGTATAGTGGAATCCATGTATTGAAAGAGAAAAGTAACATGAAAGATATTCGATTCACCAAACCAGAGACTGATGACTCCTATCATTAG 3663 0.365 MASHTVTDRFKYDVFLSFRGEDTRYSFTGYLKKALDDKGGIRTFIDEKNLQKGEEITPSLLKAIEESMMAIVVLSENYASSSFCLQELSKILDTMKDKAGRYVLPIFYKVDPSDVRKLKKSFGEAMDKHKANSNLDKWKGSLHQVADLSGFHYKGDMPEHIFIGEIVEQILGNIEPVALPIGDYLVGLEYQKQHVTSLLNIGSDDTVHMVGIYGIGGIGKTTLALSVCNLIACQFDASCFLENVRENHEKHGLPYLQKIILSKLVGEKNELTGVLQGISLLEQRLQQKKLLLILDDVNDLEQLKALAGKHKWFGPSSRIIITTRDKKLLTGHGVKCTYEVRGLNDKDAFRLVRWKAFKDEFSPSYNDVSLAQTHVLKRVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQLSFDALEDDEKFVFLDISCCLKGWNLTKVEEILHAHYGDIMKDHINVLVEKSLIKISDSGDVTLHDLIEDMGKEIVKQESPEDPGKRTRLWDSKDIMKVFKENTGTSNIKVIHFQFDPCREKRHEEWESFVKKWGGQDLNEKMINWIDKKRSEVWDGKAFKKMKNLKTLILSSSVCFSEAFKHIPNSLRVLEYCNRNPNSCNSFYVLNASVDHTSNPFEWKGFLTKKFDNLRVLNYDDYHTRLTRIPDISNLPNLEEFSIQNCKQLFTIDESVGFLGKLKILRFICCPNIHSVPPLISASLVELNLSHCDSLESFPLVVSGFHGELKILRVIGCGKIKLIPSLVLPSLEELDLSDCTSLESFSHMVDGFGDKLKTMSFRGCIELRSIPPLKLDSLEKLDLSGCQNLVSISPLKLDSLKILDLSNCYKLESFPIVVDGLLDKLKFLNIENCIMLRNIPRLRLPSLEHFNLSHCYSLESFPEILGDMRNIPGLLLDETSIKELPFPFQNLTRPQTFVPCNCGYSCIPNRASLMSKMAELTIQAEEKVSPIQSSHVKYICVMYCKLSDEYLSKTLLLFANVKELHLTNNEFTIIPKSIENCHFLWKLLLDDCTELKEIKGIPPCLRELSALNCILTSACKSKLLNQELHEARNTWFRLPRVPKIPEWFDHKCEAGLSISFLFRNKFPAIALCVVSPVTFDGSQPHGVRVIINGNIFSYPDSSKMGTKSKPNMYHLHLFHMQMENFNDNIDKALLENKWNHAEVYFGFPFMYSGIHVLKEKSNMKDIRFTKPETDDSYH 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04139 1220 SUPERFAMILY L domain-like 797 1091 - -
Mepo5g04139 1220 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 151 IPR035897 -
Mepo5g04139 1220 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Mepo5g04139 1220 SUPERFAMILY L domain-like 490 882 - -
Mepo5g04139 1220 Gene3D Ribonuclease Inhibitor 957 1076 IPR032675 -
Mepo5g04139 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Mepo5g04139 1220 Gene3D - 177 336 IPR027417 -
Mepo5g04139 1220 Gene3D Ribonuclease Inhibitor 501 751 IPR032675 -
Mepo5g04139 1220 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Mepo5g04139 1220 Gene3D Ribonuclease Inhibitor 752 836 IPR032675 -
Mepo5g04139 1220 Gene3D Ribonuclease Inhibitor 837 913 IPR032675 -
Mepo5g04139 1220 Pfam NB-ARC domain 191 418 IPR002182 GO:0043531
Mepo5g04139 1220 SMART till_3 11 148 IPR000157 GO:0007165
Mepo5g04139 1220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 788 IPR044974 GO:0006952
Mepo5g04139 1220 PRINTS Disease resistance protein signature 837 853 - -
Mepo5g04139 1220 PRINTS Disease resistance protein signature 284 298 - -
Mepo5g04139 1220 PRINTS Disease resistance protein signature 383 397 - -
Mepo5g04139 1220 PRINTS Disease resistance protein signature 209 224 - -
Mepo5g04139 1220 Pfam TIR domain 11 173 IPR000157 GO:0007165
Mepo5g04139 1220 Gene3D - 343 432 IPR042197 -
Mepo5g04139 1220 Gene3D - 6 176 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04139 Mepo-Chr5 52808011 52813002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04139 207 909 WRKY Transcription Factor Family AT5G45050 29.614 2.96e-62 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04139 - - mtr:25479587 1566.21