Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04082 ATGCTAGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAAGCTCAGGAGATGGAGCAGGAGCTTACCATGATGGTGGTGGTGGATCAATTTCAGGTGATGATGAAAGAGGGGGTGGAAGTAGAAATGAAGAGGGTGTGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACACTTGCTTTGTTGAAGATAAGGTCTGATATGGATGGTGCTTTTAAAGATGCAAGTGTTAAAGGTCCCTTATGGGATGAAGTTTCAAGGAAAATGGCAGATCTTGGGTATCAAAGAAACTCCAAAAAATGCAAAGAAAAATTTGAGAATGTTTACAAATATCACAAGAGAACCAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATGCATCAATCACCTTCAATAACAGCACCACCACAAACACAAACACAAACACCCATTAGTACTATTCCCACCCCTACAACAACACCTTCATTTCTATCTGCACCTCCATTGTTAAACTCTACACCTCCTAATACCACTACTGTTCCATCAACCACAATTACAACTACACTTCCAATTCCAATGTCTTACACACAATCCAACCCTACACATTTTCCACCAACAAACCCTACAAATACTAATAACCCTCTTCCTCAAATTACTATTACACCCCCACCATCTTCATTTCCCAACATTTCAACAGATTTCTTCTCAAATTCAAGTTCGTCTTCAACTTCTTCGGAGGAAACGACGACAATGGAAGGGGAAGGGGGATCGAATCGGCGGAAGAGGAAGAGAAAATGGAAGGATTTCTTTGAGAGACTAATGAAGGAGGTTGTTGAGAAACAAGAGGAGTTGCACAAGAGGTTCTTGGAAGCTATAGAGAAAAGAGAAAGAGAGAGAGGAGCTAGAGAAGAAGCTTGGAGGTTGCAAGAGATGCAAAGGATTAATAGAGAAAGGGAAATTCTTGCTCAAGAGAGATCTATTGCTGCTACTAAAGATGCTGCTGTTATGGCTTTTTTGCAGAAGATTGCTGAACAACAAGAACAACAAAATCTTGTTCCTCCTGTATTGAACAACAGCACAATTGTTCCGCAACAACAACAAGCGCCACAAGTAACTACACCAACACCGATACCGACACCAACACCAACACCGACACCATTGCCAGCACCAGCAGCACCATTGCCAATACCAATACCGGCAATACCAACACCGCAACAAGTTCAAACTCCAACTGTAACGGTGCAACAAGCAACACCAGTCATTCCTCAGGCTTCACCGTTGCCACAACATCAACAGCAGCAGCAACATCAGGTTCAGGTACAACAGCAGCAAGTGACGAATATGGAAGTTGCGAAAAGTGACAACAATGGTGAGAGTATGATGCATGCAAGTTCTTCTAGGTGGCCAAAAACTGAGGTAGAGGCATTGATAAAGCTGAGAACAACTCTTGATATGAAATACCAAGAAAATGGACCTAAAGGGCCATTATGGGAGGAGATTTCAGGGTTGATGAAGAAAATGGGGTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAGGAAAGCAACAAGAAAAGGCCAGAAGATTCAAAGACATGTCCTTACTTTCACCAACTTGATGCTCTATACAGGCAGAAGAACAAGGTGGAAGGCACAGCCGCTGCGTCGAGGCCTGAGGGAACGATGATGGCACCATTGATGGTTCAGCCGGAGCAGCAATGGCCTCCACAGCAACAGGCGCCACCAGCAGCCGGGGCAGATGTGACCATGGAGGATGCTGAGACTGAGAATGATCGGCCGCGTCGAGATGAGGAAGAATATTATGATGATGATGACGGTGATGATGACGAGGACGAAGATGAAGGTAGTGACAATTATGAAGTGGTTGCCAACAATCCACCGCCACCACAATAA 1983 0.4367 MLGDSAVLGTGGGSSGDGAGAYHDGGGGSISGDDERGGGSRNEEGVDRSFGGNRWPRQETLALLKIRSDMDGAFKDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSMHQSPSITAPPQTQTQTPISTIPTPTTTPSFLSAPPLLNSTPPNTTTVPSTTITTTLPIPMSYTQSNPTHFPPTNPTNTNNPLPQITITPPPSSFPNISTDFFSNSSSSSTSSEETTTMEGEGGSNRRKRKRKWKDFFERLMKEVVEKQEELHKRFLEAIEKRERERGAREEAWRLQEMQRINREREILAQERSIAATKDAAVMAFLQKIAEQQEQQNLVPPVLNNSTIVPQQQQAPQVTTPTPIPTPTPTPTPLPAPAAPLPIPIPAIPTPQQVQTPTVTVQQATPVIPQASPLPQHQQQQQHQVQVQQQQVTNMEVAKSDNNGESMMHASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLMKKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKNKVEGTAAASRPEGTMMAPLMVQPEQQWPPQQQAPPAAGADVTMEDAETENDRPRRDEEEYYDDDDGDDDEDEDEGSDNYEVVANNPPPPQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04082 660 Coils Coil 290 310 - -
Mepo5g04082 660 ProSiteProfiles Myb-like domain profile. 53 111 IPR001005 -
Mepo5g04082 660 SMART sant 51 113 IPR001005 -
Mepo5g04082 660 SMART sant 476 538 IPR001005 -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 208 275 - -
Mepo5g04082 660 Pfam Myb/SANT-like DNA-binding domain 478 565 IPR044822 -
Mepo5g04082 660 Pfam Myb/SANT-like DNA-binding domain 53 139 IPR044822 -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 1 54 - -
Mepo5g04082 660 CDD GT1 478 543 - -
Mepo5g04082 660 CDD GT1 53 118 - -
Mepo5g04082 660 Gene3D - 55 116 - -
Mepo5g04082 660 Gene3D - 480 541 - -
Mepo5g04082 660 ProSiteProfiles Myb-like domain profile. 472 536 IPR001005 -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 630 648 - -
Mepo5g04082 660 FunFam Trihelix transcription factor GT-2 55 116 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 615 629 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 236 264 - -
Mepo5g04082 660 PANTHER FI21293P1 33 612 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 142 194 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 377 396 - -
Mepo5g04082 660 FunFam Trihelix transcription factor GT-2 480 541 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 594 660 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 219 235 - -
Mepo5g04082 660 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04082 Mepo-Chr5 51810474 51814098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04082 42 597 Trihelix Transcription Factor Family AT1G76880 53.497 4.97e-160 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo5g04082 Myb_DNA-bind_4 7.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04082 - - gmx:547624 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04082 5 51810474 51814098 Mepo5g04082 5 51810474 51814098 ECH
Mepo5g04082 5 51810474 51814098 Mepo4g04158 4 51398799 51402440 PCT