Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04079 ATGGAAGGGAATTTATCACAAGGAGGTATAGTTCAAGGTGGTGGTGGTTCTTTTGGTGGTTTTGATTTGCCGGGATCGATGCGAGTTCACCGTCAAGGGCAGCATCCACATACGATGAACCAACATCAAGCTCATCCATGTCAAGGGCCGTCTGTGAATTCCTCGATTAATGAAGGTTTTCCTCTTACAATGGGGACGTTGAAGAACTGTGATCAGACGATGTCGATGAATGAGTTTAGTCAGGGAGATAGAAGCAAACACTCGGGGAGTGAGGAAGATGAGCCGGAGGAAGGTGGTGATGGTCATCATCAAGAAGGAAGTAGAGGGAAAAAGGGGTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTGTCTTATATTGGCGAGGACGGGACTTCTTCTGAAGGTGGTGGTGGTGGTGGAAGGAGAAAATTTGCTGTGTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCCAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGATATAAAAGGCTTAATGATATGCTTGGAAGGGGAACTTCTTGTCAAGTTGTTGAAAATCCGGCTTTGTTGGATGTAATCGAATATCTTAACGAGAAAGAAAAGGATGATGTTAGAAAAATATTGAACTCGAAACATCTCTTCTATGAAGAGATGTGTTCTTACCATAATTGTAATAGATTGCATTTGCCGCATGATCCTGCATTGCAACGGTCCTTGCAAATAGCTCTCCGAAATAGAGATGATCATGATAACGATGATGTGAGAAGGTCCTATCATGATGATCATGACGAGGATGATCATGATATGGAAACGGACGATCATGATGAGTTTGAAGAGAACTATGCTTCACATGGTGATAGTCGAGGAATCTTTGGGGGATTGGGGGGAACTACGAAAAGACTAAGACAAGGCCAAGGTAACGAAGATGCTGCTACTTTTGGGAATTCTTTAAATTGTCAGGAGTACCATAAAAGTTCGTATCCTCATGGTCAGATGGTCCAACTGGATGGAAATCAAGCTTTACCGGAAAACATGAAAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCGGTTCAGTTAGAAGAACAGAAGCTACAGATTCAGGTTGAGATGATGGAACTAGAGAAACAAAAATTCAAGTGGGAGAGGTTTAGCAAGAAAAAAGACCGAGAGTTGGAGAAGTTCAAGCTGGAGAATGACAGAATGAAGATTGAGAATGAACGTATTGCTTTAGAACTAAAGCGAAAGGAGATCGGCGGCACCAGCTTTAACTAG 1353 0.4272 MEGNLSQGGIVQGGGGSFGGFDLPGSMRVHRQGQHPHTMNQHQAHPCQGPSVNSSINEGFPLTMGTLKNCDQTMSMNEFSQGDRSKHSGSEEDEPEEGGDGHHQEGSRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGTSSEGGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIEYLNEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDDHDMETDDHDEFEENYASHGDSRGIFGGLGGTTKRLRQGQGNEDAATFGNSLNCQEYHKSSYPHGQMVQLDGNQALPENMKAAWLQKQWVESRSVQLEEQKLQIQVEMMELEKQKFKWERFSKKKDRELEKFKLENDRMKIENERIALELKRKEIGGTSFN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04079 450 Pfam Myb/SANT-like DNA-binding domain 117 245 IPR044822 -
Mepo5g04079 450 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
Mepo5g04079 450 Coils Coil 383 403 - -
Mepo5g04079 450 Gene3D - 120 194 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 78 116 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 84 116 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 33 51 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 273 288 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 273 299 - -
Mepo5g04079 450 Coils Coil 411 440 - -
Mepo5g04079 450 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04079 Mepo-Chr5 51739542 51741746 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo5g04079 Myb_DNA-bind_4 2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04079 - - gmx:100812134 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04079 5 51739542 51741746 Mepo5g04079 5 51739542 51741746 ECH
Mepo5g04079 5 51739542 51741746 Mepo4g04159 4 51423719 51425326 PCT