Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04058 ATGGCATCACCAAACCAACAAACCAAATATGATCTTGAGCAAAATTCAACAACCCTAGAAGTTGAAACAAAAGATTTTGACTACTCAAAAAGATCACAATGGCTAAGAGCAGCAGTTTTAGGAGCTAACGACGGATTAGTCTCCACAGCTTCGCTAATGATGGGTGTCGGTGCAGTCAAGCAAGACATCAAAGCAATGATCTTAACCGGTTTTGCCGGGTTGGTAGCCGGTGCATGCAGCATGGCAATAGGTGAATTTGTCTCTGTATACTCACAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGAGGGAGAGAAATCAATGATGATGAAGAGAAAGAAAGTTTGCCTAATCCTTTACAAGCTGCAGCTGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTACTTGCAGCTTTTTTCATAAGGGATTATAAGGTGAGAGTTGGTGTTGTTGTAGCTGCAGTTAGTTTTGCTTTGCTTGTTTTTGGTTGGTTAGGAGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGTTTGGTGGTTGGATGGCTATGTCTATTACTTTTGGGCTTACTAAGTTGATTGGGACAAGTGGACTTTAG 633 0.4076 MASPNQQTKYDLEQNSTTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGREINDDEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRVGVVVAAVSFALLVFGWLGAVLGKAPIFRSVLRVLFGGWMAMSITFGLTKLIGTSGL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04058 210 Coils Coil 97 117 - -
Mepo5g04058 210 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 205 IPR008217 GO:0005384|GO:0030026
Mepo5g04058 210 CDD Nodulin-21 33 179 - -
Mepo5g04058 210 Pfam VIT family 35 115 IPR008217 GO:0005384|GO:0030026
Mepo5g04058 210 Pfam VIT family 116 202 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04058 Mepo-Chr5 51256704 51259322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04058 1 210 Nodulin-like Gene Family AT3G43660 67.619 1.19e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04058 K22736 - gmx:100815165 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04058 5 51256704 51259322 Mepo4g04164 4 51517673 51518736 PCT