Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04046 ATGGAACAAAACAACTTCACAAGAAAACCACCACCTGTTATCATTGACTTAGAAACCATGCCACCATCACGTGGGACCCACCACCGCCGTTCACACTCCGACACCACCTTCCGTTTCGCGGCAAACTTCGACGATCTCCTCACCTTCGACCCGTCCGACTTCGATATCTCCAACCTCCCTCTTCCGTCCCCTGAGGCTGTCCCGATGGACTCTGATGAGTCCATCGGAAAGTCAGCGTCTGAGGGACGGCATCTCAGGAGTTTGTCTGTGGATTCTGAGTTTTTTGATGGGTTAGGGTTTGGTGGTGAGGGGGAAAAGGTGGAAGAGAGGAAGGTGAGTAGACATAGGTATAGTAGTTCGATGGATGGGTCTGAGATGGGGTTGTTTGAGGTTGGTGATGGTGTGAAGAAATCTATGCCGGCTGAGAAACTTGCTGAACTTGCTCTTATTGATCCTAAGAGAGCTAAAAGGATTCTTGCGAATAGGCAATCTGCTGCACGATCAAAAGAGAGGAAAACTCGATATACAAGTGAGCTGGAGAGGAAAGTGCAGACGCTTCAAACTGAAGCAACTAACCTCTCTGCACAACTTACAGTCCTTCAGAGAGATACCACTGATTTGACTGCTCAGAATAAGGAGCTCAAAATGAAGTTAGATGCCTTCGAGCAACAAGCACAGCTTAGAGAAGATCTCAATGAAGCGTTGAAGAAAGAACTTCAACGCCTTAGGGCGCAAAAGAATCATTTGGCTGCCGTCGCCGGTAATCCTTCTTTTAATGGGATGTTCACCCAATTTGCTACACAGTTAACCATGCAACAAATGAGTAATCCTCAACCCCAGTACACGCAACCTGGCATGCCGCCTTCTCGTTCTGATCAACCCTTCAACAGTCGTGGCCGCCCTAACTTCATGGACTTCAATCACCAGAAGTAA 933 0.4791 MEQNNFTRKPPPVIIDLETMPPSRGTHHRRSHSDTTFRFAANFDDLLTFDPSDFDISNLPLPSPEAVPMDSDESIGKSASEGRHLRSLSVDSEFFDGLGFGGEGEKVEERKVSRHRYSSSMDGSEMGLFEVGDGVKKSMPAEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTVLQRDTTDLTAQNKELKMKLDAFEQQAQLREDLNEALKKELQRLRAQKNHLAAVAGNPSFNGMFTQFATQLTMQQMSNPQPQYTQPGMPPSRSDQPFNSRGRPNFMDFNHQK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04046 310 SUPERFAMILY Leucine zipper domain 153 205 IPR046347 GO:0003700|GO:0006355
Mepo5g04046 310 Pfam bZIP transcription factor 153 211 IPR004827 GO:0003700|GO:0006355
Mepo5g04046 310 CDD bZIP_plant_RF2 154 203 IPR044759 GO:0003700|GO:0006355
Mepo5g04046 310 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
Mepo5g04046 310 MobiDBLite consensus disorder prediction 1 32 - -
Mepo5g04046 310 Gene3D - 152 206 - -
Mepo5g04046 310 FunFam Transcription factor VIP1 152 205 - -
Mepo5g04046 310 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
Mepo5g04046 310 Coils Coil 176 252 - -
Mepo5g04046 310 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 284 - -
Mepo5g04046 310 MobiDBLite consensus disorder prediction 272 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04046 Mepo-Chr5 50990324 50995146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04046 8 306 bZIP Transcription Factor Family AT1G43700 43.966 5.39e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo5g04046 bZIP_1 2.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04046 K20557 - gmx:778142 361.303