Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04010 ATGATAGATGCACACTATGCCCTAAACCTAGCCCCAGAAACACTTTATCTTTGTGTCAATATTATTGATCGATTTCTTTCCAAATTCAATCCTGCCTCAATACCAATAGAGAAAATTAAGTTTGTTCCTCACACCTCATTGTTGTTAGCTTCTAAGTATGAACAAAGACATAAACTTCATGTTCATGACTTGGTACACATACCCCCGGAAGTTGTGTGTGAAACCGAGAACCTTATACTGCAAAAACTGGATTGGAATTTAACAGTTACAACACCTTATGTGTTCCTTGTTAGAAATGTAAAGGCGTTATCCGATGAAGACAAGATCATGAAAAATATGGTGTTTTTCTTTTCAGAGCTCAGTTTGACACATTATTCAATTGTGTGTGACTATAAACCTTCTATGATTGCTGCTTCTGCTGTGTATTGTGCAAGAATTGTTGTTGGAAGGTATCCTTTATGGAGCAGTGATTTGAAGATATGTACCGGATACTCGGAGAAGGAGCTAAGATCTTGTGCTATGGTTATGATAGAGTTGTGCAATGAAATTTGTAGAGATGGAACCATGCATGTGTTTAGGAAATTTTCAAGTCGAGATTATTGTGAGGTTGCATGTGTTGCTAAACAAGAAATCTCCAAGAAACTTTTTTATCCTAGAATTTGTCTCAATATGGGACAATATTGTTTTTTTCAGTTTATTAAGAGCTTGAAAGCCTTATATTAA 723 0.3555 MIDAHYALNLAPETLYLCVNIIDRFLSKFNPASIPIEKIKFVPHTSLLLASKYEQRHKLHVHDLVHIPPEVVCETENLILQKLDWNLTVTTPYVFLVRNVKALSDEDKIMKNMVFFFSELSLTHYSIVCDYKPSMIAASAVYCARIVVGRYPLWSSDLKICTGYSEKELRSCAMVMIELCNEICRDGTMHVFRKFSSRDYCEVACVAKQEISKKLFYPRICLNMGQYCFFQFIKSLKALY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04010 240 PANTHER CYCLINS 1 188 IPR039361 -
Mepo5g04010 240 Gene3D - 1 82 - -
Mepo5g04010 240 Pfam Cyclin, N-terminal domain 1 88 IPR006671 -
Mepo5g04010 240 SUPERFAMILY Cyclin-like 1 87 IPR036915 -
Mepo5g04010 240 Coils Coil 233 240 - -
Mepo5g04010 240 Gene3D - 83 217 - -
Mepo5g04010 240 PIRSF Cyclin_A_B_D_E 1 217 IPR046965 GO:0016538|GO:0044772
Mepo5g04010 240 SMART cyclin_7 94 178 IPR013763 -
Mepo5g04010 240 SMART cyclin_7 1 81 IPR013763 -
Mepo5g04010 240 SMART Cyclin_C_2 90 209 IPR004367 -
Mepo5g04010 240 SUPERFAMILY Cyclin-like 91 208 IPR036915 -
Mepo5g04010 240 Pfam Cyclin, C-terminal domain 91 205 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04010 Mepo-Chr5 50027771 50028493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04010 1 204 Core Cell Cycle Gene Families AT2G26760 38.756 6.77e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04010 K21777 - pvy:116130998 173.711