Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04005 ATGTCAGGAATAGGTAAGAAAGTGGCAATAGGAATCGACCTAGGAACAACCAATTCTTGTGTTGCAGTGTGTAAGAATGGAGAGGTAGATATAATAGTGAACGACCAAGGGAAAAGAACAACGCCTTCTTGTGTTGCATTCGAAAACTCTCAGAGAATGATTGGTGATGCTGCTTCAAACCGAACAAACACTATTTTCGATGCAAAGAGGCTAATTGGTCGGAAATTTTGTGATCCCATAGTACAAAGTGATGTGAAGTTGTGGCCATTCAAAGTAATTGGCGACCAGAATGACAAACCCATGATTGTTGTTAACTATAATAACGAGGAAAAGCATTTTGCTGCTGAAGAAATCTCATCCATGGTATTGGGAAAAATGCGCGAGATAGCTGAAGCTTACCTTAGATCAACAGTGGAGGATGTTGTCATAACCGTGCCTGCTTACTTCAATGATTCACAACGCCAGTCTACTCGAGATGCGGGTGTTATTGCTGGCCTCAATGTTATGCGAATAATCAATGAGCCTACTGCAGCTGCAATTGCATATGGCTTTGACACGAAACCATTTAATCATGGATGTAGAAATGTTTTCATTTTTGACTTAGGTGGTGGTACTTTGGACGTGTCTGTTCTCACATTTGAGCGTGGTGATATCAATGTTAAGGCCATTAATGGAGACACTCATCTCGGGGGACAAGACTTTAATAATGCAATGGTGAACCATTTTGTGAAAGAGTTCTTGAGAAAGCATAAAAATGACATTAGTGGAGATCCAAGAGCCCTTAGGAGGCTGAAGACTGCTTGTGAGAGAGCAAAATGCACACTTTCATCCAATACTGAGACTGCCATTGAGGTAGACAATTTAAATCAAGGTATAGATTTCTGCCCATTGATTAGTCGCGCAAAGTTCGAGCAACTCAACAAGAGTCTTTTTGACAAGTGCATGAAGATCGTAGAAAAGTGTCTAGCGGATAGTGGGATGGACAAGAGTAACATTCATGATGTTGTCCTTGTTGGTGGCTCTACTAGGATTGTAAAAGTGCAACAACTATTGAGTGATTTCTTTGAAGGGAAAGAGTTATGCAAAAGCATCAATGCAGATGAGGCGGTTGCATATGGCGCTGCTGTCCATGCTTTTATATTGAGTGGGCTTTGTGAAAAGTTTCAAGATTTGACATTGAAGAGGGATGTCATTCCTTTGTCCCTTGGAATTAAAATACAAGGGGGAATCATGAAAACAATATTTCCCAGGAATACCATGATTCCTACCAACAAGGAAGAAGTATTCACCACAACTATACCCAACCAAAAATTTGTTGCAATTAGTGTTTATGAGGGTGAGAGGAAAACAACTAAGGACAACAACTTGCTAGGAACTTTTAGGTTTGAAATTCCTCCATGTCCAGTAGATGTTCCTCAATTAGTGGTCAACTTCCAAATTGACAATGATGGCATCTTAGACGTCTCTGTTACGGAAAAAGCCTTGGGAATTGATAAAAGGTTTAAAATAGTAAATGACAAGGAGAGACAGTCAAAGGAGGAAGTTGAAAGGATGATCAGAGAAGCTGAGAAATACAAAGACGAAGACATGAGGCATAGGAAGAAGGTGGAAGCTGAGAAATACAAAGATGAAGACATGAGGCATAGGAAGAAGGTGGAAGCGAGAAATGCACTAGAGACGTACGCATACAATACGAGGGATTTCATAAATGATCCGGATATTTCATTTAACCAAACAAAAAGAAATCCAAATTCTTAA 1758 0.3993 MSGIGKKVAIGIDLGTTNSCVAVCKNGEVDIIVNDQGKRTTPSCVAFENSQRMIGDAASNRTNTIFDAKRLIGRKFCDPIVQSDVKLWPFKVIGDQNDKPMIVVNYNNEEKHFAAEEISSMVLGKMREIAEAYLRSTVEDVVITVPAYFNDSQRQSTRDAGVIAGLNVMRIINEPTAAAIAYGFDTKPFNHGCRNVFIFDLGGGTLDVSVLTFERGDINVKAINGDTHLGGQDFNNAMVNHFVKEFLRKHKNDISGDPRALRRLKTACERAKCTLSSNTETAIEVDNLNQGIDFCPLISRAKFEQLNKSLFDKCMKIVEKCLADSGMDKSNIHDVVLVGGSTRIVKVQQLLSDFFEGKELCKSINADEAVAYGAAVHAFILSGLCEKFQDLTLKRDVIPLSLGIKIQGGIMKTIFPRNTMIPTNKEEVFTTTIPNQKFVAISVYEGERKTTKDNNLLGTFRFEIPPCPVDVPQLVVNFQIDNDGILDVSVTEKALGIDKRFKIVNDKERQSKEEVERMIREAEKYKDEDMRHRKKVEAEKYKDEDMRHRKKVEARNALETYAYNTRDFINDPDISFNQTKRNPNS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04005 585 SUPERFAMILY Actin-like ATPase domain 7 186 IPR043129 -
Mepo5g04005 585 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 540 IPR029047 -
Mepo5g04005 585 FunFam Heat shock 70 kDa protein 385 539 - -
Mepo5g04005 585 Pfam Hsp70 protein 9 551 IPR013126 GO:0005524|GO:0140662
Mepo5g04005 585 PANTHER HEAT SHOCK PROTEIN 70KDA 9 570 IPR013126 GO:0005524|GO:0140662
Mepo5g04005 585 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mepo5g04005 585 SUPERFAMILY Actin-like ATPase domain 194 381 IPR043129 -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 204 214 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 8 21 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 36 48 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 332 348 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 391 410 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 471 487 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 141 161 - -
Mepo5g04005 585 PRINTS 70kDa heat shock protein signature 364 384 - -
Mepo5g04005 585 ProSitePatterns Heat shock hsp70 proteins family signature 2. 198 211 IPR018181 -
Mepo5g04005 585 Gene3D - 187 361 - -
Mepo5g04005 585 Gene3D - 10 378 - -
Mepo5g04005 585 FunFam Heat shock 70 kDa 230 313 - -
Mepo5g04005 585 Gene3D - 539 582 IPR029048 -
Mepo5g04005 585 Gene3D - 66 121 - -
Mepo5g04005 585 Coils Coil 505 528 - -
Mepo5g04005 585 Gene3D Actin; Chain A, domain 4 230 313 - -
Mepo5g04005 585 FunFam Heat shock protein 70 10 195 - -
Mepo5g04005 585 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 382 538 IPR029047 -
Mepo5g04005 585 FunFam heat shock 70 kDa protein-like 66 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04005 Mepo-Chr5 49860559 49865859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04005 1 575 Calmodulin-binding Proteins AT3G12580 63.746 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04005 K03283 - twl:119989252 715.687