Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g04003 ATGGCAGCAAAAGGTGAGAAAGTTGCAATAGGAATCGACCTAGGAACAACCTATTCTTGTGTTGCTGTATGGAGGCATGATAGGATAGAGATCATACCGAACGACCAAGGGAATAGAACAACACCTTCTTATGTTGCATTCACTGACTCTCAAAGAATGATTGGTGATCCTGCTTTCAATATAGCTGCTTGCAAACCAACCAACACTGTTTTCGTGGCGGAAGCATAA 228 0.4254 MAAKGEKVAIGIDLGTTYSCVAVWRHDRIEIIPNDQGNRTTPSYVAFTDSQRMIGDPAFNIAACKPTNTVFVAEA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g04003 75 PRINTS 70kDa heat shock protein signature 8 21 - -
Mepo5g04003 75 PRINTS 70kDa heat shock protein signature 36 48 - -
Mepo5g04003 75 FunFam heat shock 70 kDa protein-like 3 75 - -
Mepo5g04003 75 Gene3D - 1 75 - -
Mepo5g04003 75 PANTHER HEAT SHOCK PROTEIN 70KDA 9 73 IPR013126 GO:0005524|GO:0140662
Mepo5g04003 75 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
Mepo5g04003 75 SUPERFAMILY Actin-like ATPase domain 7 71 IPR043129 -
Mepo5g04003 75 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g04003 Mepo-Chr5 49811641 49812019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g04003 1 74 Calmodulin-binding Proteins AT3G12580 77.027 6.88e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g04003 K03283 K14823 dct:110113152 119.398