Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03998 ATGGTAAAATCATCAGAATCAGCGGCGCAATATGAACGATTTTCAAAGGATTTTGTAATGGGAGGTGCAGCAGCAATCATATCCAAAACTGCAGTGGCACCAATTGAGAGAGTGAAGCTTTTATTACAAAACCAAAGCGAAATGATTAAAAGAGGAAACCTTAAAACACCATACCTTGGTTTATCTAACACCTTTAAGAGGGTCTTTGCTGAAGAGGGTCTCCTTGCCTTTTGGAGAGGTCACCAGGCCAATGTTATTAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAACCATCTTTGGATTTTCCAGAGACAAAGATGGTTACATCAAGTGGTTTGCTGGCAATGTGGCTTCTGGCAGTGCTGCCGGAGCTACTACCTCAATACTTTTGTATCATTTGGACTTTGCACGTACAAGATTGGCCACTGATGGTCACCGTCAGTTTAAAGGACTAATTCATGTATATAGTAAAACAATATCAACTGATGGTGTTGCTGGCTTGTACAGGGGATTTGGTGTTTCAATATTGGGAATCACCATGTATCGAGGAATGTACTTTGGGATATATGACACCATGAAGCCTATTGTTTTAGTTGGCCCTTTTGAGGCAAGCATTTATACATTTATTTATAATCACAGGCAATGTTAG 669 0.3976 MVKSSESAAQYERFSKDFVMGGAAAIISKTAVAPIERVKLLLQNQSEMIKRGNLKTPYLGLSNTFKRVFAEEGLLAFWRGHQANVIRYFPTQAFNFAFKGYFKTIFGFSRDKDGYIKWFAGNVASGSAAGATTSILLYHLDFARTRLATDGHRQFKGLIHVYSKTISTDGVAGLYRGFGVSILGITMYRGMYFGIYDTMKPIVLVGPFEASIYTFIYNHRQC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03998 222 Pfam Mitochondrial carrier protein 118 202 IPR018108 -
Mepo5g03998 222 Pfam Mitochondrial carrier protein 13 107 IPR018108 -
Mepo5g03998 222 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085
Mepo5g03998 222 PRINTS Mitochondrial carrier protein signature 17 30 IPR002067 GO:0055085
Mepo5g03998 222 PRINTS Mitochondrial carrier protein signature 132 150 IPR002067 GO:0055085
Mepo5g03998 222 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085
Mepo5g03998 222 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Mepo5g03998 222 SUPERFAMILY Mitochondrial carrier 12 206 IPR023395 -
Mepo5g03998 222 PRINTS Adenine nucleotide translocator signature 14 26 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mepo5g03998 222 PRINTS Adenine nucleotide translocator signature 91 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mepo5g03998 222 PRINTS Adenine nucleotide translocator signature 58 79 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mepo5g03998 222 PRINTS Adenine nucleotide translocator signature 117 130 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mepo5g03998 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 202 IPR018108 -
Mepo5g03998 222 Gene3D Mitochondrial carrier domain 7 217 IPR023395 -
Mepo5g03998 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 105 IPR018108 -
Mepo5g03998 222 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 9 216 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03998 Mepo-Chr5 49770017 49770685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03998 12 211 Antiporters AT5G17400 73.430 6.96e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03998 K05863 - gmx:100776735 340.117