Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03989 ATGGCTTATAGGAACAATAGAGTTTGCGACCATCTAACCCTAGGAGTGTGCCACTGTACAAGCAATGATGACTCTTGGAACATCAAGAAAGTGTTGAAACAAACTGATGTTGGTTATTGCAGTCGACTTTTGTTAGGTAAAAAATTGGCTGAAGAATTTTTGTTACCTGTGTTGGGTGCTAAAGCTCATAGAGGAATTCAAGTTAAAATATGGGATATTGACACCAAGTCCATGCACTCTATCAAATTCAAGAGAAGGTCTGGAATGTATTTTTTCAATGGTGGTTGGGTCAAAGAGTTTGTAATCAGAAGAGACTTACAAGAAGGGAATAAGATTGGTCTTTATTGGGATCAATATGGAAAATTCTTTAATTTCACTGTTCTTGAGGCCGATAAGGATCATAATAGACACTATGTTTAA 420 0.3643 MAYRNNRVCDHLTLGVCHCTSNDDSWNIKKVLKQTDVGYCSRLLLGKKLAEEFLLPVLGAKAHRGIQVKIWDIDTKSMHSIKFKRRSGMYFFNGGWVKEFVIRRDLQEGNKIGLYWDQYGKFFNFTVLEADKDHNRHYV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03989 139 SUPERFAMILY DNA-binding pseudobarrel domain 23 125 IPR015300 -
Mepo5g03989 139 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 20 130 - -
Mepo5g03989 139 CDD B3_DNA 26 128 IPR003340 GO:0003677
Mepo5g03989 139 Gene3D - 20 138 IPR015300 -
Mepo5g03989 139 SMART B3_2 28 131 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03989 Mepo-Chr5 49687671 49688090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03989 28 123 B3 DNA Binding Superfamily AT3G24650 36.634 6.00e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03989 - - mtr:25495087 290.426