Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03960 ATGATCATGCTAACAATACCTCTAGTTTTGACTGGCACACTCATCATCACCTTATTCCTTTTTGCTTCTCACCAAACAAAATCCCTCAAAACCCCAGCCTTCACAAATTGGCCATTTATTGGCATGTTACCACAATTCCTTTGGAATGTAGCAGACATTCATGAATTTTCAGCTAAATTGTTGAAATCAAAAGGTGGAACAATTGAGTTCCTAGGACCATGGTTTACCGGCATGTATGGTGTAATCACAACTGATCCATTGAATGTTCACTACATCATGAGCAAGAGCTTTGACAACTTTGTCAAAGGTGATTTGTTTCGTGAAATGTTCGAACCTTTTGGTTTAGGAATTTTCACTACAGATTCAGATCAATGGAAATACAATAGGAATCTTCTCCAATATCTCTTCAAACAAAGAAGCTTTGAAGCTTTTCAAGAGAAAATCATTCACAACAAAGTTGAGAAATCATTGATTCCTTTATTGAATCATGTTCAACAACAAAAAGGGTCGGTGGTCGATTTACAAGATGTGTTCAATCGATTCACATTCGATAACATTTGTTTGATAATTCTTGGACATGATCCAAATTGTCTTTCAACAGATTTCCCCGAAGTTCCATCTGAGAAAGCTTTTAACCAAGCGGAAGAGTCCATCTTCTATAGACACACCGTGCCGATTTGTGTTTGGAAGTTGCAAAGTTGGCTTCAAATCGGAGAAGAGAAGAAAATGACCGAGGCATGCAGAGTATTCGATCAATTCCTATTTTCATGTATAGCTTCAAAGCGTGAAGAGCTAAAGAAAAATTGTAACAAAAATGAAATCAATGCTGAAAGTGATGATGCTCATCATGTTGATATGCTAACGGCATTGATTAGAGAAGAAAAAAACAAGGGTAGTGAAAGTGAATCACTTGGTGACAAGTTTCTAAGAGATGCTGCATTCAATCTCTTTGTAGCGGGGAGAGATACCATAACTTCTGCGCTTACATGGTTATTTTATCTTGTCGCTACACACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAAAATTTTGGACACAAAGAGAAGCCTTGGATTTTAAGTGTCGATGATGTGAAAAAACTTGTTTATCTTCATGGTGCTATATGTGAGGCATTGAGGCTTTTTCCACCAATACCTTTTGAGAGAAAGGAAGCGGTTAAACCCGATATACTTCCAAGTGGTCATCATGTTTATCCGAATAATATGATATTGTTTTCTTTGTATGCAATGGGAAGGGATGAAGATATTTGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGCATTGTTTATGCTCCGTCTTACAAGTTCTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAGAGAGCTGGCTTTCATTCAAGTTAAGATGGTCGCTGCTTCTGTTTTGTGGAACTATTGTGTCCATGTTGTGGAAGGTCATCAAGTCACTCCTAACCTTTCAATTGTGCTTCTCATGGAACATGGTCTCAAGGTTAAGATAACCAAAAGGGGAATTTAA 1554 0.3797 MIMLTIPLVLTGTLIITLFLFASHQTKSLKTPAFTNWPFIGMLPQFLWNVADIHEFSAKLLKSKGGTIEFLGPWFTGMYGVITTDPLNVHYIMSKSFDNFVKGDLFREMFEPFGLGIFTTDSDQWKYNRNLLQYLFKQRSFEAFQEKIIHNKVEKSLIPLLNHVQQQKGSVVDLQDVFNRFTFDNICLIILGHDPNCLSTDFPEVPSEKAFNQAEESIFYRHTVPICVWKLQSWLQIGEEKKMTEACRVFDQFLFSCIASKREELKKNCNKNEINAESDDAHHVDMLTALIREEKNKGSESESLGDKFLRDAAFNLFVAGRDTITSALTWLFYLVATHPLVEAKILEEIKENFGHKEKPWILSVDDVKKLVYLHGAICEALRLFPPIPFERKEAVKPDILPSGHHVYPNNMILFSLYAMGRDEDIWGKDCLEFKPERWISERGGIVYAPSYKFFSFNAGPRTCLGRELAFIQVKMVAASVLWNYCVHVVEGHQVTPNLSIVLLMEHGLKVKITKRGI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03960 517 CDD CYP86A 69 508 - -
Mepo5g03960 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 SUPERFAMILY Cytochrome P450 31 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 PANTHER CYTOCHROME P450 24 510 - -
Mepo5g03960 517 Pfam Cytochrome P450 33 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mepo5g03960 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Mepo5g03960 517 Gene3D Cytochrome P450 21 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03960 Mepo-Chr5 49425772 49427325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03960 34 516 Cytochrome P450 AT2G23180 45.082 1.82e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03960 - - tpra:123904061 922.924