Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03948 ATGGAGTCTCCTATGACTGCAGTTGAAACTATATCAGAGGTTCAGCATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCCATATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCGGCAAAATTATGCAGCAAGCAACTGTTTGATGATGATTCCGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATTGTATCTTAGTTCCATCAAAACGTGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCTTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCGGAAGCGAAACAAAGTTTCACCAGCACTGAAGTCAGTGAGTGTGTTAGTGTTGATAATAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTTTGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGCGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACATGAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGAGGGGATGATGGAAATGAGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCAAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCGGAGCACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAACCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTCGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTAGTGAAGTCATCAAACCCAATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCACGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGTGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCATTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCCAATCCGCCAGAGGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTAATTATTTAGAATTTGATTACTTTTGA 1887 0.4208 MESPMTAVETISEVQHSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSISFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPAKLCSKQLFDDDSENFDSSSEVLESDNCILVPSKRAVVNQPKNYYSQSETSFCLSPQNSYYSATVYSEAKQSFTSTEVSECVSVDNKSCESGEVPNFCDFNESRKTSICRASTGSDVSDESNMSSLSGALYKPHKANDIRWEAIQAVRAREGMMEMRHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTKLATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGMNPSGNYLEFDYF 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03948 628 PANTHER FLIPPASE KINASE 1-RELATED 98 606 - -
Mepo5g03948 628 ProSiteProfiles Protein kinase domain profile. 251 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03948 628 FunFam Serine/threonine-protein kinase D6PK-like 249 334 - -
Mepo5g03948 628 SMART serkin_6 251 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03948 628 Gene3D Transferase(Phosphotransferase) domain 1 335 403 - -
Mepo5g03948 628 FunFam serine/threonine-protein kinase D6PK-like 335 402 - -
Mepo5g03948 628 Gene3D Transferase(Phosphotransferase) domain 1 476 600 - -
Mepo5g03948 628 CDD STKc_phototropin_like 249 600 - -
Mepo5g03948 628 FunFam serine/threonine-protein kinase D6PK-like 477 600 - -
Mepo5g03948 628 Gene3D Phosphorylase Kinase; domain 1 249 334 - -
Mepo5g03948 628 SUPERFAMILY Protein kinase-like (PK-like) 231 605 IPR011009 -
Mepo5g03948 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Mepo5g03948 628 Pfam Protein kinase domain 479 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g03948 628 Pfam Protein kinase domain 252 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03948 Mepo-Chr5 49302197 49304818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03948 158 628 AGC Kinase Gene Family AT5G47750 69.028 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo5g03948 Pkinase 2.5e-37 CL0016