Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03946 ATGGAGAAAGAGATTTTGGAAAATCTTTGGAATGGTGATAGTGAAGCTCAAATTCAAGCAGCAATGAAACTTGGTAGATTGTCCAATAAGCAAAAGCACAATTTGGCAGAAAGTGGAGTTATGGTTCCTCTTGTTTCCATGCTTCATTCTCAAAACTATGAAGTCATAGAAGCTTCTCTTTGTGCTTTTCTCAGCCTCTCCTTTGGCAGTGAAAGAAACAAGATTCGGATTGTAAGGTATGGCGTTTTACCAATTTTGCCGAACCTCCTCCATTGTGAAAGTCAGACGGTGATACAATTATCAGTAGCAGCAATGTTAACACTTTCTTCTTGCAAGAGAAATAAGGTAGCAATAGCTTCATCTGGTGCAGTTCAAATTTTGGTTGAACTTATCAATAGTAGTAACATTGAAACTCAGTCTCAACTAGACACTATAGCTACTCTCCACAACCTCACAACCTGCCAAGAGATAATTCCATTGATTGCATCTTCTGGTGTTATATTCTCCTTGCTTCAACTTATCCATGGCTCGGTAAAATCGTCTTCATTGGTTGACAAAGCGACAGGGTTGCTAGAAAATATTGTTTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACCAGAGGAGCGATTCAGATACTGGTTGAGACTATTGAAGATGGGTCATCACTAGGAAAAGAGAATGCGGTTGGTATACTTCTCCTTATATGTCAAAAATGCAGAGAAAAATATAGAGTACTGATTTTGACAGAGGGAGTAATGCCAGGATTGCTTCAGTTAAGCGTCGATGGAACGTGGAGAGCCAAATCCACAGCTAGAGAACTGCTGTTGCTTCTGAGAGACTGCTCCAGTTATAGCTCGAGACGTACACAAATTAATCACGAGCTTATAGAACAGATAATGGAAGAAATTGATACAGAAGGAGAGAAATTGACAGATACTACTCTGAGATTGGTAGAGGAGATGATTGCAAAGCTCAATACATAA 990 0.397 MEKEILENLWNGDSEAQIQAAMKLGRLSNKQKHNLAESGVMVPLVSMLHSQNYEVIEASLCAFLSLSFGSERNKIRIVRYGVLPILPNLLHCESQTVIQLSVAAMLTLSSCKRNKVAIASSGAVQILVELINSSNIETQSQLDTIATLHNLTTCQEIIPLIASSGVIFSLLQLIHGSVKSSSLVDKATGLLENIVSSSESALCEAASTRGAIQILVETIEDGSSLGKENAVGILLLICQKCREKYRVLILTEGVMPGLLQLSVDGTWRAKSTARELLLLLRDCSSYSSRRTQINHELIEQIMEEIDTEGEKLTDTTLRLVEEMIAKLNT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03946 329 Gene3D - 204 303 IPR011989 -
Mepo5g03946 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 200 IPR000225 GO:0005515
Mepo5g03946 329 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 166 IPR000225 GO:0005515
Mepo5g03946 329 FunFam U-box domain-containing protein 4 202 318 - -
Mepo5g03946 329 Pfam Kinesin-associated protein (KAP) 28 164 - -
Mepo5g03946 329 Gene3D - 3 203 IPR011989 -
Mepo5g03946 329 SUPERFAMILY ARM repeat 4 311 IPR016024 -
Mepo5g03946 329 SMART arm_5 111 153 IPR000225 GO:0005515
Mepo5g03946 329 SMART arm_5 70 110 IPR000225 GO:0005515
Mepo5g03946 329 SMART arm_5 28 68 IPR000225 GO:0005515
Mepo5g03946 329 SMART arm_5 154 196 IPR000225 GO:0005515
Mepo5g03946 329 FunFam U-box domain-containing protein 4 3 198 - -
Mepo5g03946 329 PANTHER U BOX DOMAIN-CONTAINING 5 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03946 Mepo-Chr5 49288295 49289837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03946 3 282 U-box Gene Family AT2G23140 32.517 1.49e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03946 - - gmx:100778534 491.886