Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03942 ATGTCTTATTTGGATGAAGACGATGGTCCAAAGCAATGGGACTTGGAGCTTAGTGCTCTTCTCAAGAGCGAGGAATCCGACAAAGTTTTGCAGGATTTGAACATTGTATTACAACAAGGATGCTATCAAAACAGAAGGGTAAAGAAAGCTTTCTACTATTCAGACCAGATTCTAAAGTCTGTACTACCAGGATTGAAACTCTTAACTGATTCGTTCCAGAGTATTCGCAATACTCAGAACAGACTCTCTCTAAACGTCGACAAGTGCATCTATGAGCTCATGAAGGATAGGCCTGTGATGGATATCAACGATCTCCTCGATGGTATAATGATAAGTGATGGTTATGGACAAATAATGAGCAAACAATACATTGTATGCAATGTTTTATCATGCTTTGCTGATGAGACCATATATGCCAAAGAAGAATCCATTCTTGTATATCTCAAAACGGTTCATGACGTTGAGCTGAAGTATACAAGACTTCATTGTCTGGTAGCAAAAAAAAACGAACTAAATGTTCGTTGTGTAAACCTCCTAATGGAGTTATGCAGAATTGTGGAGGGCCAACGGGGCCGTCAACCAAAGAAGATGCAAGGTCTCAGTGAAAAGTGGAGAAGTATCACTGAGGTCAGCAAATTTCAGTAA 645 0.3969 MSYLDEDDGPKQWDLELSALLKSEESDKVLQDLNIVLQQGCYQNRRVKKAFYYSDQILKSVLPGLKLLTDSFQSIRNTQNRLSLNVDKCIYELMKDRPVMDINDLLDGIMISDGYGQIMSKQYIVCNVLSCFADETIYAKEESILVYLKTVHDVELKYTRLHCLVAKKNELNVRCVNLLMELCRIVEGQRGRQPKKMQGLSEKWRSITEVSKFQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03942 214 ProSiteProfiles PAZ domain profile. 130 187 IPR003100 GO:0005515
Mepo5g03942 214 SUPERFAMILY PAZ domain 91 193 IPR036085 GO:0005515
Mepo5g03942 214 Gene3D paz domain 50 191 - -
Mepo5g03942 214 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 18 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03942 Mepo-Chr5 49231632 49232856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03942 17 190 Eukaryotic Initiation Factors Gene Family AT1G48410 28.230 4.31e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03942 K11593 - dct:110106297 55.8398