Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03933 ATGGAGAGGATTAACATCAAAGGAAGAAGAGAATACAATAATGGCTCTTGGCTTGAAGAGTCAGAGTTTAATGCTCTTCTCAAGAGCGAGGAAGCGGATGTGGATGTAACCGAAAAGGTTTTGCAGGATTTGAACTTTGTATTACAACAAGGACGCTATCAAGATAGAAGGTATCAAAGGGTAGACATGGCTTTCTACTCTTTAGATCAGGCTCCAAAGGCTGTACTACCAAGAGTGAAATTCTTAACTGGTTTATTCCAGAGCATTCGCAATACTCAGAACGGACTCTCTCTGAATATCGGTGATATTTTCAACCTATTGTTCATAAAAATTGATACAGACAAGTGCACCTTCGGGTTCATGATAGATGGGCCTGTGATAGATGTCATCAAGTTATGCTTAGGAAAAAGCCTAACAGACGAGAATCTGGGGGATGATACTCGATTGGAGATCAGAGATCTCCTCGATGGTATAATGATAACTGCTAGTTATGGACAAGTCTTGAGCAAACAATATATTGTATGTGATGTTTCATCATGCTCTGCTGATGAGACCATAGTTGGAGCTTAG 570 0.4018 MERINIKGRREYNNGSWLEESEFNALLKSEEADVDVTEKVLQDLNFVLQQGRYQDRRYQRVDMAFYSLDQAPKAVLPRVKFLTGLFQSIRNTQNGLSLNIGDIFNLLFIKIDTDKCTFGFMIDGPVIDVIKLCLGKSLTDENLGDDTRLEIRDLLDGIMITASYGQVLSKQYIVCDVSSCSADETIVGA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03933 189 SUPERFAMILY PAZ domain 30 177 IPR036085 GO:0005515
Mepo5g03933 189 Pfam Argonaute linker 1 domain 65 109 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03933 Mepo-Chr5 49156149 49159038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03933 3 184 Eukaryotic Initiation Factors Gene Family AT1G48410 27.041 9.52e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03933 - K00604 egr:104456414 57.7658