Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03928 ATGGCAGAAACCAACTCAGCCCTTCTTAATGTATCCCCATGGACCAGGATGCAACCATTGAATGGCTTATGTGTATGTGTGCGCGTGCGCATAAGAAGTTCATTCCTTTTCTCTTGTGCTAAAGACCGTAACCCTGCCGCGTGGTTTGCTGACAACAGTGAACGTCTGGGAACTTATCGAGGCCATAATGATGTTGTCTGGTCTGTTGATGGTTCACATTTCCTGATTGACTCCCTTGGTAAGTCTGCTAAGGTAGTACTTGGAGGTGGTCAGTATGCATCGTCTATTACAACTACTAATCATCGTGCTGGAAAATTTGAAGAAGTTCTATGA 333 0.4474 MAETNSALLNVSPWTRMQPLNGLCVCVRVRIRSSFLFSCAKDRNPAAWFADNSERLGTYRGHNDVVWSVDGSHFLIDSLGKSAKVVLGGGQYASSITTTNHRAGKFEEVL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03928 110 SUPERFAMILY WD40 repeat-like 19 73 IPR036322 GO:0005515
Mepo5g03928 110 Gene3D - 22 75 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03928 Mepo-Chr5 49104462 49105732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03928 27 85 Eukaryotic Initiation Factors Gene Family AT2G46280 50.794 2.62e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03928 K03246 - atri:130799677 69.707