Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03927 ATGATGGCCTCAAGCTACTCAAATTCTCCATGTGCTGCTTGCAAGTTTCTAAGAAGAAAATGCAACCAAGATTGCATCTTTGCACCTTATTTCCCACCAGAAGAGCCTCATAAGTTTGCAAATGTTCACAAAATATTTGGTGCAAGTAATGTTAGCAAAATTCTTAATGAAGTCTTACCTCATCAAAGAGAAGATACAGTGAATTCTCTAGCATATGAAGCTGAAGCAAGGATTAAAGATCCAGTGTATGGTTGTGTTGGAGCTATTTCAGTGCTTCAAAGACAACTCCTTAAGCTTCAAAAGGAACTTGATGCTACAAATGCCGATTTGATTCGCTTAAATCATCAAGGTTCTTCTTCTCTTGGTCTTGGACATGTTCATTCTGATGGTTTTTTTAATTGTCCATCTAATTTGAGCAATGATTCTTGTGGGGATTCCTACAGCAAAGGTGATATATAA 459 0.3704 MMASSYSNSPCAACKFLRRKCNQDCIFAPYFPPEEPHKFANVHKIFGASNVSKILNEVLPHQREDTVNSLAYEAEARIKDPVYGCVGAISVLQRQLLKLQKELDATNADLIRLNHQGSSSLGLGHVHSDGFFNCPSNLSNDSCGDSYSKGDI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03927 152 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 115 - -
Mepo5g03927 152 Coils Coil 89 116 - -
Mepo5g03927 152 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mepo5g03927 152 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03927 Mepo-Chr5 49099143 49100018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03927 1 122 AS2 family AT3G27650 75.397 1.37e-68 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03927 LOB 7.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03927 - - mtr:11423777 291.582