Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03926 ATGGCCTCAAGCTACTCAAATTCTCCATGTGCTGCATGCAAGTTCCTAAGAAGAAAATGCATATCAGATTGCATTTTTGCACCTTATTTCCCACCAGAAGAGCCTCATAAATTTGTCAATGTTCACAAAATATTTGGTGCAAGCAATGTTAGCAAAATTCTAAATGAAGTTTTACCTCATCAAAGAGAAGATACAGTGAATTCTCTAGCTTATGAAGCTGAAGCAAGGATTAAAAATCCAGTGTATGGTTGTGTTGGAGCTATTTCAGTGCTCCAAGGACAACTCTTTAGGCTCCAAAAGGAAATTGATGCTACAAATGCTGATTTGATTCGATTTACTCATGAAGGTTCTTCTTCTCTTGGTCTTGGACATGTTCACTCTGATGACTTTTTCAATTACCCTTCAAATTTTAGCAATAATGACATGTGA 429 0.366 MASSYSNSPCAACKFLRRKCISDCIFAPYFPPEEPHKFVNVHKIFGASNVSKILNEVLPHQREDTVNSLAYEAEARIKNPVYGCVGAISVLQGQLFRLQKEIDATNADLIRFTHEGSSSLGLGHVHSDDFFNYPSNFSNNDM 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03926 142 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 114 - -
Mepo5g03926 142 Pfam Lateral organ boundaries (LOB) domain 9 105 IPR004883 -
Mepo5g03926 142 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03926 Mepo-Chr5 49086915 49087343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03926 3 112 AS2 family AT3G27650 80.909 7.73e-67 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo5g03926 LOB 6.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03926 - - mtr:11421075 268.855