Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03919 ATGTTACCAACCACCATGAAACCCGCCATCCCCAAACCAGTTTTCCTCACTAAAGCAACTGACTTGATCAGCCAGCATGTGATCATGATGAAGGAATCTGAGAAAAATTATAACCTTCGCAGATTGTTGGATGCGACTGCGATTGTGTTTGTCAACACCAAGAAGAGAGCTGATTTTCTTGCTAAGAATTTGGACAAGGAAGAGTATCGCGTGACCACTTTGCACGGAGGGAAATCACAGGATCAGAGGGAGATTAGTCTTGAAGGATTTAGGACCACTTTGCTATTGTTATGCCTGACTAGAGTTGCTACCTGTTTATTATATTTCTAA 330 0.4212 MLPTTMKPAIPKPVFLTKATDLISQHVIMMKESEKNYNLRRLLDATAIVFVNTKKRADFLAKNLDKEEYRVTTLHGGKSQDQREISLEGFRTTLLLLCLTRVATCLLYF 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03919 109 Gene3D - 15 105 IPR027417 -
Mepo5g03919 109 Pfam Helicase conserved C-terminal domain 43 102 IPR001650 -
Mepo5g03919 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 101 IPR027417 -
Mepo5g03919 109 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 38 109 IPR001650 -
Mepo5g03919 109 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 14 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03919 Mepo-Chr5 49017845 49018174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03919 25 91 Eukaryotic Initiation Factors Gene Family AT5G11200 35.211 9.89e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03919 K12858 - bvg:104883288 122.094